PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650176.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 580aa MW: 65647 Da PI: 6.5211

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	402	446	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN+ fe Lr+llP++ K +Ka++L+++ eY+ sL XP_021650176.1 402 HMISERRRREKINETFEALRKLLPPD-----AKKDKASVLTRTREYLTSL 446 8899*******************7.....699**********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYRPQLNH CLYFLDGDYH EQTNQSGSSS 60 GSLARWLFDK YRAEAFLIVN DRVPGMAFGN KQPYTELNES ELQRMASVSV QKQFYQTAVF 120 MGCRSGEIEI GWSNGMTQIN MENAMRSLFS EVVIPQKQSS PRELSHVIDP NWPSSSSSSL 180 RSLSMDSPDS SPFLFNVPTT SHIPEVPQET PSLQQISSTS SAIQQVLQSL QPVQSTSSPL 240 QLAMQSLQPE PSTTNPLQLA MQSLQPVPST TSPLQPAMQS LHPIPSTTNP HQVAMQTFSL 300 TRNVQLPSQE SEDDAIIRAI LAVLASPSTS TNSSIMPNSP YHYRESQKAS AFKDYIAPTR 360 QTRQNLHGQS LLKRAITYYR SLNILRPEHM PASRPSNTQL HHMISERRRR EKINETFEAL 420 RKLLPPDAKK DKASVLTRTR EYLTSLNAQV EELRKRNQKL EAQVQQLPTK EVAEEGSESS 480 NERIELRVAH VSESTSEEQR IIDLQVVLRG ECPIQEILIR ILEFLNQVNN VNVMSIEANT 540 RTTESRSMNR VVLRLKIEGE EWDESGFQEA VRRVVDDLAQ

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYRPQLNH CLYFLDGDYH EQTNQSGSSS  60
GSLARWLFDK YRAEAFLIVN DRVPGMAFGN KQPYTELNES ELQRMASVSV QKQFYQTAVF  120
MGCRSGEIEI GWSNGMTQIN MENAMRSLFS EVVIPQKQSS PRELSHVIDP NWPSSSSSSL  180
RSLSMDSPDS SPFLFNVPTT SHIPEVPQET PSLQQISSTS SAIQQVLQSL QPVQSTSSPL  240
QLAMQSLQPE PSTTNPLQLA MQSLQPVPST TSPLQPAMQS LHPIPSTTNP HQVAMQTFSL  300
TRNVQLPSQE SEDDAIIRAI LAVLASPSTS TNSSIMPNSP YHYRESQKAS AFKDYIAPTR  360
QTRQNLHGQS LLKRAITYYR SLNILRPEHM PASRPSNTQL HHMISERRRR EKINETFEAL  420
RKLLPPDAKK DKASVLTRTR EYLTSLNAQV EELRKRNQKL EAQVQQLPTK EVAEEGSESS  480
NERIELRVAH VSESTSEEQR IIDLQVVLRG ECPIQEILIR ILEFLNQVNN VNVMSIEANT  540
RTTESRSMNR VVLRLKIEGE EWDESGFQEA VRRVVDDLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	406	411	ERRRRE
2	407	412	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	3e-57	bHLH family protein