PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650175.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 585aa MW: 66244.7 Da PI: 6.6564

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	407	451	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN+ fe Lr+llP++ K +Ka++L+++ eY+ sL XP_021650175.1 407 HMISERRRREKINETFEALRKLLPPD-----AKKDKASVLTRTREYLTSL 451 8899*******************7.....699**********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYRPQLNH CLYFLDGDYH EQTNQSGSSS 60 GSLARWLFDK YRAEAFLIVN DRVPGMAFGN KQPYTELNES ELQRMASVSV QKQFYQEARI 120 KTAVFMGCRS GEIEIGWSNG MTQINMENAM RSLFSEVVIP QKQSSPRELS HVIDPNWPSS 180 SSSSLRSLSM DSPDSSPFLF NVPTTSHIPE VPQETPSLQQ ISSTSSAIQQ VLQSLQPVQS 240 TSSPLQLAMQ SLQPEPSTTN PLQLAMQSLQ PVPSTTSPLQ PAMQSLHPIP STTNPHQVAM 300 QTFSLTRNVQ LPSQESEDDA IIRAILAVLA SPSTSTNSSI MPNSPYHYRE SQKASAFKDY 360 IAPTRQTRQN LHGQSLLKRA ITYYRSLNIL RPEHMPASRP SNTQLHHMIS ERRRREKINE 420 TFEALRKLLP PDAKKDKASV LTRTREYLTS LNAQVEELRK RNQKLEAQVQ QLPTKEVAEE 480 GSESSNERIE LRVAHVSEST SEEQRIIDLQ VVLRGECPIQ EILIRILEFL NQVNNVNVMS 540 IEANTRTTES RSMNRVVLRL KIEGEEWDES GFQEAVRRVV DDLAQ

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYRPQLNH CLYFLDGDYH EQTNQSGSSS  60
GSLARWLFDK YRAEAFLIVN DRVPGMAFGN KQPYTELNES ELQRMASVSV QKQFYQEARI  120
KTAVFMGCRS GEIEIGWSNG MTQINMENAM RSLFSEVVIP QKQSSPRELS HVIDPNWPSS  180
SSSSLRSLSM DSPDSSPFLF NVPTTSHIPE VPQETPSLQQ ISSTSSAIQQ VLQSLQPVQS  240
TSSPLQLAMQ SLQPEPSTTN PLQLAMQSLQ PVPSTTSPLQ PAMQSLHPIP STTNPHQVAM  300
QTFSLTRNVQ LPSQESEDDA IIRAILAVLA SPSTSTNSSI MPNSPYHYRE SQKASAFKDY  360
IAPTRQTRQN LHGQSLLKRA ITYYRSLNIL RPEHMPASRP SNTQLHHMIS ERRRREKINE  420
TFEALRKLLP PDAKKDKASV LTRTREYLTS LNAQVEELRK RNQKLEAQVQ QLPTKEVAEE  480
GSESSNERIE LRVAHVSEST SEEQRIIDLQ VVLRGECPIQ EILIRILEFL NQVNNVNVMS  540
IEANTRTTES RSMNRVVLRL KIEGEEWDES GFQEAVRRVV DDLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	411	416	ERRRRE
2	412	417	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	3e-57	bHLH family protein