PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650172.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HSF
Protein Properties Length: 434aa    MW: 48483.4 Da    PI: 4.7692
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.65.5e-351152062102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Flkk++e++ed+e+++++sws+n +s++v++ +ef+k++LpkyFkh nf+SFvRQLn+YgF+k++ ++         weF+++ F+ g+k+ll++
  XP_021650172.1 115 FLKKTFEMVEDPETDSTVSWSKNRDSLIVWNAHEFSKHLLPKYFKHCNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFRGGNKHLLKN 200
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     ikr+++
  XP_021650172.1 201 IKRRSR 206
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MEMPVVHESS RVTCAACGEA SLGGLPLSSS PSIKTAEIQK AAAEETLKVA TIKAEEEEGG  60
EEDKGAIAIV QSGKCFNGGG GEVEGVSDNR SLSSCFSVDL PKSMEGLHET GPPPFLKKTF  120
EMVEDPETDS TVSWSKNRDS LIVWNAHEFS KHLLPKYFKH CNFSSFVRQL NTYGFRKIDP  180
DRWEFANEGF RGGNKHLLKN IKRRSRYNKQ QQGAAGGDDS AKPGLEAELE SLKNDQDLLR  240
IEILNLKQQQ ENSENQLSIV EQRIGVAECK QLQMFIFLAK AAKNRAFIQN LFQKRKQQRE  300
LDGSEFKKSK LLSTQIPENL PDAADASQSV NCRHQAQEQL AAMQTELTEM VSNDTEANTI  360
SKLIENSISD EFCSPIQDQK ANLICGTNDR ETVYHLMSEK LLDDNAVSEN LVEEDLEVNE  420
TKFYLELENL IVKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198204LKNIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-80HSF family protein