PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650016.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 315aa    MW: 35692.3 Da    PI: 6.141
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.75.4e-40771761100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l++ ++++am+++++++++ra+dPv G++++i++lq+q+e +kael+
  XP_021650016.1  77 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKPLSQPDKDEAMRTIIFQSDVRASDPVGGCYRIIRELQRQIEYHKAELD 171
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     l+ ++
  XP_021650016.1 172 LVLHQ 176
                     98776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSISPPISLH LPFSLVFLHR EKEGSATTRE KKEAPLKKTA PSPPATQPIS HHQQKQTITT  60
TSNNMSIPRI GNGTTQACAA CKYQRRKCAP DCILAPYFPH DRQRQFLNAH KLFGVSNITK  120
IIKPLSQPDK DEAMRTIIFQ SDVRASDPVG GCYRIIRELQ RQIEYHKAEL DLVLHQLAIC  180
RAQAHQQTHF QMLETDDSAT LGCEIVNQDS LDIYDPTMMQ YHYPQTQEEE QEFVVPDHDQ  240
QLQELVVNET AALTIQDSTH VVSSSSSPSL HNVKQPYVNE CDDIKPLLDI NDVKFEPEEL  300
VERNFVPSTQ LVISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.11e-70LBD family protein