PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021650001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 313aa MW: 35621.2 Da PI: 6.1046 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.7 | 5.4e-40 | 77 | 176 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l++ ++++am+++++++++ra+dPv G++++i++lq+q+e +kael+ XP_021650001.1 77 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKPLSQPDKDEAMRTIIFQSDVRASDPVGGCYRIIRELQRQIEYHKAELD 171 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_021650001.1 172 LVLHQ 176 98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MSISPPIALH LPFSFVFLHR EKEGSATTRE KKEAPLKKTA PSPPATQPIS HHQQKQTITT 60 TSNNMSIPRI GNGTTQACAA CKYQRRKCAP DCILAPYFPH DRQRQFLNAH KLFGVSNITK 120 IIKPLSQPDK DEAMRTIIFQ SDVRASDPVG GCYRIIRELQ RQIEYHKAEL DLVLHQLAIS 180 QAHQQTHFQM LETDDSTTLE CEIVNQDSLD IYDPTMMQYH YPQTQEEEQE FVVPDHDQQL 240 QEHLVNETAA LTIQDSTHVV SSSSSPSLHN VKQPYVNECD DIKPLLDIND VKFEPEELVE 300 RKFVPSTQLV ISS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 9e-70 | LBD family protein |