PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021649815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 290aa MW: 30640.2 Da PI: 5.4339 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.5 | 1.4e-16 | 200 | 236 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cgt++ Tpl+Rrgp g++tLCnaCGl+++ kgl XP_021649815.1 200 CNHCGTSSksTPLMRRGPAGPRTLCNACGLKWANKGL 236 *********************************9997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 290 aa Download sequence |
MNIQTHLEEE DEDMVGGGEE SVENPNIHYE NGNGTDGGVD GVLPSGIRDT GGPDYPLVVA 60 NGGNADQLTL SFQGEVYVFD AVAPDKVQAV LLLLGGCEIP SSIPTAGTVP LNLRVPSDLP 120 GRSIQPQRAA SLHRFREKRK ELCFDKKIRY SVRKEVALRM QRKKGQFASS KASSDEAGSA 180 SSGCSATQGS GQDDMLETSC NHCGTSSKST PLMRRGPAGP RTLCNACGLK WANKGLLRDL 240 SKISRMAIQG PPAKSIEQSE GKANGMDAVT VAADIVSSFN GDNSTLTAET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G51600.2 | 2e-68 | GATA family protein |