PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649636.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 479aa MW: 54260.6 Da PI: 4.7164

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.4	6.1e-32	55	194	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyW 83 lp+G++F+Ptd e++++ L+k g ++++ i++ +i++++P++Lp +v+ + + +fF+++ k+y+tg+rk+r+++ + +W XP_021649636.1 55 LPRGVKFDPTDLEIIWHLLAKVGMGGLephpfIDEFIPtINKDdGICYTHPQNLP-SVRLDGSVSHFFHRAIKAYNTGTRKRRKVQgddfaDVRW 148 799**********777766644443576553333333555536******.566688899***************85555555899 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tg++k+v+ +g ++g+kk++v+y + r k+ekt+Wvmh+y+l XP_021649636.1 149 HKTGRTKPVIL-DGVQKGCKKIMVLYmsTVRGGKAEKTNWVMHQYHL 194 *********.99********6556888999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MAGPSWLVDG HRFARKIKSA SNPEKVIWES NPSKACPNCH HAIDNSDVTQ KWPGLPRGVK 60 FDPTDLEIIW HLLAKVGMGG LEPHPFIDEF IPTINKDDGI CYTHPQNLPS VRLDGSVSHF 120 FHRAIKAYNT GTRKRRKVQG DDFADVRWHK TGRTKPVILD GVQKGCKKIM VLYMSTVRGG 180 KAEKTNWVMH QYHLGTGEDE REGEYVVSKI FYQQQQTNKG DKIEDGLHEN IDIMITKVDP 240 VTPKSVTPEP PRTERRCLDF DLGEQQTNKG DIVEDDLPEN IDNKIAKVDP VTCKSVTPEP 300 LHTQRRCLDF DLGEESTVIN DYIDPCTQYS PKHVEVQTEP ECEYPNSDDQ FKTENLSEQM 360 VDNNDTDIEQ ELNCWDSELQ NLLDSQQIVE GLSLCDELLQ SQSPNRYGNG NERANQKPRL 420 SDYAQLGPED LKKDLEECQN LVLGPANVEL DTPSEFRLSQ LEFGSQESFL SWGGGKAID

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MAGPSWLVDG HRFARKIKSA SNPEKVIWES NPSKACPNCH HAIDNSDVTQ KWPGLPRGVK  60
FDPTDLEIIW HLLAKVGMGG LEPHPFIDEF IPTINKDDGI CYTHPQNLPS VRLDGSVSHF  120
FHRAIKAYNT GTRKRRKVQG DDFADVRWHK TGRTKPVILD GVQKGCKKIM VLYMSTVRGG  180
KAEKTNWVMH QYHLGTGEDE REGEYVVSKI FYQQQQTNKG DKIEDGLHEN IDIMITKVDP  240
VTPKSVTPEP PRTERRCLDF DLGEQQTNKG DIVEDDLPEN IDNKIAKVDP VTCKSVTPEP  300
LHTQRRCLDF DLGEESTVIN DYIDPCTQYS PKHVEVQTEP ECEYPNSDDQ FKTENLSEQM  360
VDNNDTDIEQ ELNCWDSELQ NLLDSQQIVE GLSLCDELLQ SQSPNRYGNG NERANQKPRL  420
SDYAQLGPED LKKDLEECQN LVLGPANVEL DTPSEFRLSQ LEFGSQESFL SWGGGKAID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-176	NAC family protein