PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021649520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 542aa MW: 58599.9 Da PI: 6.9138 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.6 | 3e-29 | 306 | 364 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++prsYYrCt++ gCpv+k+v+r+aed+ v+++tYeg H+h+ XP_021649520.1 306 SDGCQWRKYGQKLAKGNPCPRSYYRCTMSsGCPVRKQVQRCAEDQAVLVTTYEGCHDHP 364 7***************************99****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 542 aa Download sequence |
MHDIIVMDPS TDRLVSHSCD GGHRSISHGN RIITEMDFFA DANCPKQKPP PTAIVKTEAM 60 DDGVGRQNEE DINTSLNLLT GSIGSDNKSI VEDGASQNKE AYNQRKKELE LLHAKINHMN 120 AENQRLKGIL NQVNNNHYFL QMHLVALMQR LQNQNTITVK NEEVIHGTLE EKQHVGSIIA 180 RHFLDLGKAE IGEIGEGCSQ SVSEERSRDC SISPNIVESM ENNKPPVVSS SSISGVVPVL 240 DHLKRSAGGI KNCETSEEAF HGWVPNKVPK FNTSRDVDDE QKAVTSSMIR KARVSVRARS 300 EASTISDGCQ WRKYGQKLAK GNPCPRSYYR CTMSSGCPVR KQVQRCAEDQ AVLVTTYEGC 360 HDHPLPPAAM AMASTTSAAA SMLLSGSMPS HDELMNANLL AKTFPCPPCF ATLSASAPFP 420 TVTLDVTPPP ASNSSQRLQG HFLLPSLNFP NNFTSTPHVS AQALYNQSKV SGLLSPHKGM 480 ELPQIIPPLA DSTVSAATAA ITSDPNFTAA LAAAISSIIG NIQANSNSNS SPTLRNSIDN 540 ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G62300.1 | 2e-79 | WRKY family protein |