PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 144aa MW: 16267.5 Da PI: 9.3206 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 134.3 | 4.8e-42 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C++dC++apyfp+++p++fa+vhk++Gasnv k+l++lp+++r +a++sl+yeA++r++dPvyG+vg+i+ l qq+++++++la XP_021649066.1 5 RCAACKYLRRRCPSDCIFAPYFPSNNPQRFACVHKIYGASNVGKMLQQLPTHKRVQAANSLYYEAQCRIQDPVYGCVGIISLLLQQIHKAENQLA 99 6********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_021649066.1 100 KTQAE 104 *9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MNSERCAACK YLRRRCPSDC IFAPYFPSNN PQRFACVHKI YGASNVGKML QQLPTHKRVQ 60 AANSLYYEAQ CRIQDPVYGC VGIISLLLQQ IHKAENQLAK TQAEIAVLSN SHTQDSQFQQ 120 NFLLQQGNVG QSSRPSTQPS SWFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26620.1 | 2e-59 | LBD family protein |