PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 429aa MW: 46922.9 Da PI: 7.2157 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26 | 1.6e-08 | 105 | 126 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 + C+++ + G C+yGd+C++ H+ XP_021649060.1 105 KVCNYWVQ-GKCSYGDKCRYLHS 126 68******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MDLDAQGGNS RVFQRLRAQP SNDNRQQKVC HHWRAGRCSR YLCPYLHREL PPPPPAGSNG 60 NASKRGFSDD SGFSGPSGTR RSGNFNNASS WGRLGNNKIL RKTEKVCNYW VQGKCSYGDK 120 CRYLHSWSLG DSFSFLTQLD GHQKVVTGIA LPTGSDKLYT GSNDETVRVW DCQSGQVCMG 180 VIQLGGEVGC MISEGPWIFV GVPNVVKAWN TQTNTDLSLT GPVGQVYALV VGNEFLFAGT 240 QDGAILAWKF NAVTFNFEPA ASLTGHTVAV VSLVVGADRL YSGSMDHSVR VWNLETLQCV 300 QTLTEHSSVV MSVLCWDQFL LSCSLDQTIK VWAATESGNL EVAYTHNEEH GLLTLCGMHD 360 LEGKPVLLCS CNDNSVRLFD LPSFSERGKI YAKQEIRSIQ TGPGGLFFTG DGTGQVRVWK 420 FVAEPTVSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25440.1 | 0.0 | C3H family protein |