PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649060.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 429aa    MW: 46922.9 Da    PI: 7.2157
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH261.6e-08105126426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     + C+++ + G C+yGd+C++ H+
  XP_021649060.1 105 KVCNYWVQ-GKCSYGDKCRYLHS 126
                     68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MDLDAQGGNS RVFQRLRAQP SNDNRQQKVC HHWRAGRCSR YLCPYLHREL PPPPPAGSNG  60
NASKRGFSDD SGFSGPSGTR RSGNFNNASS WGRLGNNKIL RKTEKVCNYW VQGKCSYGDK  120
CRYLHSWSLG DSFSFLTQLD GHQKVVTGIA LPTGSDKLYT GSNDETVRVW DCQSGQVCMG  180
VIQLGGEVGC MISEGPWIFV GVPNVVKAWN TQTNTDLSLT GPVGQVYALV VGNEFLFAGT  240
QDGAILAWKF NAVTFNFEPA ASLTGHTVAV VSLVVGADRL YSGSMDHSVR VWNLETLQCV  300
QTLTEHSSVV MSVLCWDQFL LSCSLDQTIK VWAATESGNL EVAYTHNEEH GLLTLCGMHD  360
LEGKPVLLCS CNDNSVRLFD LPSFSERGKI YAKQEIRSIQ TGPGGLFFTG DGTGQVRVWK  420
FVAEPTVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein