PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649053.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 372aa MW: 39361.6 Da PI: 5.0588

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.8	1.4e-36	87	181	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......k 89 +++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++ +++ + + ++ + + XP_021649053.1 87 TPAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVsINGTLKIPTTSPARPngddllS 181 5789************************************************************7777744321111111111111112222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDSNQYHTIE EIDREQSINP NFSSSETSTV EPPDPEGQAG PESTIQLKEE ELTDIDGQEL 60 DDDDNNNDNT LPISLLQVPQ SNNRALTPAK RPSKDRHTKV EGRGRRIRMP ATCAARIFQL 120 TRELGHKSDG ETIRWLLEHA EPAIIEATGT GTVPAIAVSI NGTLKIPTTS PARPNGDDLL 180 SRKRRKRPSN SDFTDVNEHQ SSVSSGLAPI TPITTAAALL PNLGGACVQG LVPWWPMGTF 240 MLPQSAGLSG GGSNYNQPQL WAIPAAATPF FNVAAKPISS FVSAMQPGIQ LGDGVSNSVG 300 SGGSSSPMGS MSSNSGTSTT NSSGGNCACN GAASANTGSA QMLRDFSLEI YDKKELQFLG 360 HPASQHPTCS KP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDSNQYHTIE EIDREQSINP NFSSSETSTV EPPDPEGQAG PESTIQLKEE ELTDIDGQEL  60
DDDDNNNDNT LPISLLQVPQ SNNRALTPAK RPSKDRHTKV EGRGRRIRMP ATCAARIFQL  120
TRELGHKSDG ETIRWLLEHA EPAIIEATGT GTVPAIAVSI NGTLKIPTTS PARPNGDDLL  180
SRKRRKRPSN SDFTDVNEHQ SSVSSGLAPI TPITTAAALL PNLGGACVQG LVPWWPMGTF  240
MLPQSAGLSG GGSNYNQPQL WAIPAAATPF FNVAAKPISS FVSAMQPGIQ LGDGVSNSVG  300
SGGSSSPMGS MSSNSGTSTT NSSGGNCACN GAASANTGSA QMLRDFSLEI YDKKELQFLG  360
HPASQHPTCS KP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	6e-70	TCP family protein