PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021648984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB_related | ||||||||
Protein Properties | Length: 200aa MW: 21965.1 Da PI: 10.7797 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 88 | 135 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT + +lv++v ++G g+W+ I r Rt ++k +w+++ XP_021648984.1 88 AWTLSDVMKLVEGVSRHGAGRWSEIKRLAFasySYRTSVDLKGKWRNL 135 7***************************9999999***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MGMTVTLVKE ALGAHNFLQD NDEKVQSAPA QVQQRFLGVP DKDIQFSATG AVKGHKVLKQ 60 VDSTGDSDNN VVTVLTSKGG IRRKHHRAWT LSDVMKLVEG VSRHGAGRWS EIKRLAFASY 120 SYRTSVDLKG KWRNLQKASL AQISSNKGIN SRKNVTSMPI PEPILLRVRE LAEMQSPVPP 180 SLSSSKVAGN SVHEKQSGYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 1e-40 | MYB_related family protein |