PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648822.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 494aa MW: 55008.3 Da PI: 4.7248

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.3e-35	12	103	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sws++ nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ eF+++ F +g+k+ll++ XP_021648822.1 12 FLSKTYDMVDDPSTNSVVSWSSSDNSFVVWNVPEFQRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------YEFANEGFLRGQKHLLKS 97 9******************999**************************************99.........78************ PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i rkks XP_021648822.1 98 ISRKKS 103 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MESLTANSVP PFLSKTYDMV DDPSTNSVVS WSSSDNSFVV WNVPEFQRDL LPKYFKHNNF 60 SSFVRQLNTY GFRKVDPDRY EFANEGFLRG QKHLLKSISR KKSLHGQSNQ PPQVQSSKVA 120 ACVEVGMFGL EEEVERLKRD KNVLMQELVR LRQQQQATDN QLQTVGQRVQ AMEQRQQQMM 180 SFLAKAMQSP GFLNQLVQQN NESNRLGGTK KRRLPGQEEE NLAVKPDSNS PNGQIVKFHS 240 SMNEAAKAML HQILKINSSS RLEPSINNSG PFLIDNLSSS NALDSNNTSS RISELMISDV 300 QPTSGPSFLP VESGFSVSHP CNAISEVQSP SCAVTDCVKT DHISEMTMRN SGQDAILPNF 360 AEIQGVVQES STGIPNTNFV NPTNGDGEDI NPMPSVLDVA TSEETDAFSS NQDTDILMDG 420 IPKLPGINDV FWEQFLTASS PTVDTEEINS SSLPSHMTRE QELQSWQENG LDNIQHMNHL 480 TEKMELLISE ARMG

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MESLTANSVP PFLSKTYDMV DDPSTNSVVS WSSSDNSFVV WNVPEFQRDL LPKYFKHNNF  60
SSFVRQLNTY GFRKVDPDRY EFANEGFLRG QKHLLKSISR KKSLHGQSNQ PPQVQSSKVA  120
ACVEVGMFGL EEEVERLKRD KNVLMQELVR LRQQQQATDN QLQTVGQRVQ AMEQRQQQMM  180
SFLAKAMQSP GFLNQLVQQN NESNRLGGTK KRRLPGQEEE NLAVKPDSNS PNGQIVKFHS  240
SMNEAAKAML HQILKINSSS RLEPSINNSG PFLIDNLSSS NALDSNNTSS RISELMISDV  300
QPTSGPSFLP VESGFSVSHP CNAISEVQSP SCAVTDCVKT DHISEMTMRN SGQDAILPNF  360
AEIQGVVQES STGIPNTNFV NPTNGDGEDI NPMPSVLDVA TSEETDAFSS NQDTDILMDG  420
IPKLPGINDV FWEQFLTASS PTVDTEEINS SSLPSHMTRE QELQSWQENG LDNIQHMNHL  480
TEKMELLISE ARMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-110	HSF family protein