PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648632.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 498aa MW: 54865.6 Da PI: 6.4113

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.2e-15	217	276	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021648632.1 217 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 276 57*****************666664478446***********************98 PP
2	AP2	50.3	6e-16	319	370	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021648632.1 319 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 370 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MAPATNWLSF SLSPMEMLRS SESQFLSYES TSTASPHYLI ENFYDNGWGI SKEAQGATTM 60 AETAILTSFI NPETHHQEAP KLEDFLGDSS SIVRYSDNSQ TETQDSSLTH IYDQGSAAYF 120 SDQQDLKAIA GFQAFSTNSG SEVDDSASIA RTQLGGGEFV GHSIESTGNE LGFSNCTGAN 180 NALSLGVNNQ SSKEKAIVPA ESDCPKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC 240 RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT TNFPVTHYTK ELEEMKYVSK 300 QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT FATEEEAAEA 360 YDIAAIKFRG MNAVTNFEMS RYDVEAIMKS ALPIGGAAKR LKLSLEAEQK PTLNHEQQPQ 420 SSSNNISFAS MAPVSTIPCG IPYENTTVYH HNLFHHLQSA NNFGGTDSSG SASSMASPMT 480 LLPQTAAAEF FIWPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MAPATNWLSF SLSPMEMLRS SESQFLSYES TSTASPHYLI ENFYDNGWGI SKEAQGATTM  60
AETAILTSFI NPETHHQEAP KLEDFLGDSS SIVRYSDNSQ TETQDSSLTH IYDQGSAAYF  120
SDQQDLKAIA GFQAFSTNSG SEVDDSASIA RTQLGGGEFV GHSIESTGNE LGFSNCTGAN  180
NALSLGVNNQ SSKEKAIVPA ESDCPKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC  240
RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT TNFPVTHYTK ELEEMKYVSK  300
QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT FATEEEAAEA  360
YDIAAIKFRG MNAVTNFEMS RYDVEAIMKS ALPIGGAAKR LKLSLEAEQK PTLNHEQQPQ  420
SSSNNISFAS MAPVSTIPCG IPYENTTVYH HNLFHHLQSA NNFGGTDSSG SASSMASPMT  480
LLPQTAAAEF FIWPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein