PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648254.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 213aa MW: 24935.9 Da PI: 9.9847

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.2	1.6e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n + rqvtfskRr g+lKKA ELS+LCdaev viifss+ kly+y+s XP_021648254.1 10 RIDNPTSRQVTFSKRRSGLLKKARELSILCDAEVGVIIFSSNSKLYDYAS 59 8***********************************************86 PP
2	K-box	84.9	1.7e-28	77	171	6	99
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ + +++ + +q+e+a L+ke++ Lq+ +R+l+Ge+L+ Ls+k+L++Le+qLe slk +R kK+++l+e+i+el +k + een +L+kk++ XP_021648254.1 77 NQQmNPASEIKFWQREAASLRKELQYLQECHRKLMGEELSGLSVKDLKNLENQLEMSLKGVRMKKDQILTEEIKELNRKGNLSYEENLKLHKKVD 171 3334678899**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MGRGKIAIRR IDNPTSRQVT FSKRRSGLLK KARELSILCD AEVGVIIFSS NSKLYDYAST 60 SMNSVIERYN KVREEQNQQM NPASEIKFWQ REAASLRKEL QYLQECHRKL MGEELSGLSV 120 KDLKNLENQL EMSLKGVRMK KDQILTEEIK ELNRKGNLSY EENLKLHKKV DLLCQENAEL 180 HKKVLISKYM HQYDNLLHLL FDSKLNILVH IRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	3e-93	MIKC_MADS family protein