PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021648089.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 787aa    MW: 86246.4 Da    PI: 6.934
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021648089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.21.3e-994257862374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v +g+++ aq +Larl+++ sp g+p++R+a+yf+eAL+  l+   ++ + alp+++ s+ +++ ++ a+k+fsevsP+++f ++
  XP_021648089.1 425 LDQLYKAAELVGTGNFSHAQGILARLNQQLSPIGKPLHRAAFYFKEALQLLLHM-NNNPVTALPSRSPSPFDVIYKMGAYKVFSEVSPLIQFVNF 518
                     679***********************************************9997.666666899999999************************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle..dl 189
                     t+Nqa+lea++ ++r+HiiDfdi+ G+QW++++q+L  R++g+psl+iT+++sp++++  e+  ++e+L++fA+e+g++fe +v+  ++le  + 
  XP_021648089.1 519 TCNQALLEALSDADRIHIIDFDIGFGAQWASFMQELP-RNRGAPSLKITAFASPSTHHPVEVLLMRENLTQFANEVGISFELDVVNFDSLEqnCY 612
                     ************************************6.789*******************************************96665541145 PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l+ +r +++Ea+aVn+ +   +  +++ +l+s    +L+++k+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s+  +k
  XP_021648089.1 613 SLSIFRPNENEAVAVNFPI--WSSSNQPSALPS----LLRFIKQLSPKIVVSLDRGCDRTDLPFPQHILHALQSYIHLLESLDAV-NVASDVVNK 700
                     666666677*******999..444445666666....*********************************************665.568999*** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+ ll+++i++ v  + ++     e++ +W+  + +aGF+pvp+s+++++qa++++++++++g++ve++++ lvl+W++r+L+s+SaWr
  XP_021648089.1 701 IEKCLLQPRIESTVLGRLRA----PEKMPNWKTIFASAGFSPVPFSNFTETQAECVVKRTPVRGFHVEKRQALLVLCWQRRELISASAWR 786
                     ***************99998....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    
MSGMPFHLQG KGGLDIDIAA FASICSKKNT RKEKLQQHEV NSFASPEPTS VLHMRRSPSP  60
PTSASTLSSS FNGGGGGGNS TDNTTTTTTP STTTATEKGV NPVSNERKDE WATELQPIPS  120
GLEIVSTGER CGLGLEDWEN MLSETNQEQS LSRWIAGDVD ESFGLRQLLQ GGNNPPDFDG  180
NGVGALGIVD QGPGFEGICG IAGGFPSIGT NLSPFPASGF PSTNNNSNGN GKVGSGLVTS  240
PSSSAGLVNY RGVGLGSNNN SNCSIQNPVF GSPASSVPLP ATLPTGMLYH HNLQHQIGAQ  300
EEKPLVLNPQ MLMNQQYPHN PHCQNPNFFL PLSFPQQENH LLQPQQKRHN SGGIDPISQM  360
IPKLQFNDPG HEILLRKQQQ QHQQHPGFPQ GMQFLHPHLQ QKPLVVKKEE VAAQHQQQQH  420
QNALLDQLYK AAELVGTGNF SHAQGILARL NQQLSPIGKP LHRAAFYFKE ALQLLLHMNN  480
NPVTALPSRS PSPFDVIYKM GAYKVFSEVS PLIQFVNFTC NQALLEALSD ADRIHIIDFD  540
IGFGAQWASF MQELPRNRGA PSLKITAFAS PSTHHPVEVL LMRENLTQFA NEVGISFELD  600
VVNFDSLEQN CYSLSIFRPN ENEAVAVNFP IWSSSNQPSA LPSLLRFIKQ LSPKIVVSLD  660
RGCDRTDLPF PQHILHALQS YIHLLESLDA VNVASDVVNK IEKCLLQPRI ESTVLGRLRA  720
PEKMPNWKTI FASAGFSPVP FSNFTETQAE CVVKRTPVRG FHVEKRQALL VLCWQRRELI  780
SASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-122GRAS family protein