PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647232.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 680aa MW: 76646.1 Da PI: 6.9614

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.9	1.2e-10	32	76	53	99
EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 53 rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ XP_021647232.1 32 EGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLGIRRA 76 678999***********************..8899999**997 PP
2	Auxin_resp	120.3	1.5e-39	101	184	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k++ka+ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k XP_021647232.1 101 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 184 79******************************87599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MSSVLQCCHW LSRGRWRWVK ITFGLLKGSL VEGQPKRHLL TTGWSVFVSA KRLVAGDSVL 60 FIWNEKNQLL LGIRRATRPQ TVMPSSVLSS DSMHIGLLAA AAHAAATNSC FTVFYNPRAS 120 PSEFVIPLSK YVKAVFHTRV SVGMRFRMLF ETEESSVRRY MGTITGISDL DPVRWPNSHW 180 RSVKVGWDES TAGERQPRVS LWEIEPLTTF PMYPSLFPLR LRRPWHPGSS SLHDNRDEAG 240 NGLMWLRGGT GEQGIHSLNF QAVNMFPWTQ QRLDPALLGN DQNQWYQAML ATGLPNLGSG 300 DPLRQQFMQF QQPFQYLQQS SSHCPLLQLQ QQHQAIQQST SHNILQAQNQ ISTESLPRHL 360 LQQQLNNQTD DHTQQQHKQQ QQQHSYHDVL QIQGEQLQRQ QPNVPSPSFS KTDFMDSNTK 420 YSASTTPIQN MLGSMCAEGS GNLLDFTRTG QSTLTTLTEQ LPQQSWVPKY AHSQVNAYTN 480 SLSLPRPYPE KDPAMEPESC NLDAQNHTNF GVNIDSSGLL LPTTLPRYAS STVDADVSSM 540 PLGDSGFQNS IYGGVQDSSE LLPSAGQVDP PTPSRTFVKV YKSGSVGRSL DISRFSSYHE 600 LREELAQMFG IEGKLENPRR SGWQLVFVDR ENDILLLGDD PWEAFVNNVW YIKILTPEDV 660 QKMGEQGLES FSPNVGQRIE

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MSSVLQCCHW LSRGRWRWVK ITFGLLKGSL VEGQPKRHLL TTGWSVFVSA KRLVAGDSVL  60
FIWNEKNQLL LGIRRATRPQ TVMPSSVLSS DSMHIGLLAA AAHAAATNSC FTVFYNPRAS  120
PSEFVIPLSK YVKAVFHTRV SVGMRFRMLF ETEESSVRRY MGTITGISDL DPVRWPNSHW  180
RSVKVGWDES TAGERQPRVS LWEIEPLTTF PMYPSLFPLR LRRPWHPGSS SLHDNRDEAG  240
NGLMWLRGGT GEQGIHSLNF QAVNMFPWTQ QRLDPALLGN DQNQWYQAML ATGLPNLGSG  300
DPLRQQFMQF QQPFQYLQQS SSHCPLLQLQ QQHQAIQQST SHNILQAQNQ ISTESLPRHL  360
LQQQLNNQTD DHTQQQHKQQ QQQHSYHDVL QIQGEQLQRQ QPNVPSPSFS KTDFMDSNTK  420
YSASTTPIQN MLGSMCAEGS GNLLDFTRTG QSTLTTLTEQ LPQQSWVPKY AHSQVNAYTN  480
SLSLPRPYPE KDPAMEPESC NLDAQNHTNF GVNIDSSGLL LPTTLPRYAS STVDADVSSM  540
PLGDSGFQNS IYGGVQDSSE LLPSAGQVDP PTPSRTFVKV YKSGSVGRSL DISRFSSYHE  600
LREELAQMFG IEGKLENPRR SGWQLVFVDR ENDILLLGDD PWEAFVNNVW YIKILTPEDV  660
QKMGEQGLES FSPNVGQRIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein