PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647231.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 832aa    MW: 93388.9 Da    PI: 6.51
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.94e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++
  XP_021647231.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEK 218
                     99*****************************9777666.49************************************************..8899 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+++++r+
  XP_021647231.1 219 NQLLLGIRRA 228
                     999****997 PP
2Auxin_resp119.92e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k++ka+  ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_021647231.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 832 aa     Download sequence    
MKLSTSGLGQ QGHEGEKKCL NSELWHACAG PLVSLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDGHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPQEQKDT FLPMELGMPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSL QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYVKAVFHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLRRPWHPG SSSLHDNRDE AGNGLMWLRG GTGEQGIHSL NFQAVNMFPW  420
TQQRLDPALL GNDQNQWYQA MLATGLPNLG SGDPLRQQFM QFQQPFQYLQ QSSSHCPLLQ  480
LQQQHQAIQQ STSHNILQAQ NQISTESLPR HLLQQQLNNQ TDDHTQQQHK QQQQQHSYHD  540
VLQIQGEQLQ RQQPNVPSPS FSKTDFMDSN TKYSASTTPI QNMLGSMCAE GSGNLLDFTR  600
TGQSTLTTLT EQLPQQSWVP KYAHSQVNAY TNSLSLPRPY PEKDPAMEPE SCNLDAQNHT  660
NFGVNIDSSG LLLPTTLPRY ASSTVDADVS SMPLGDSGFQ NSIYGGVQDS SELLPSAGQV  720
DPPTPSRTFV KVYKSGSVGR SLDISRFSSY HELREELAQM FGIEGKLENP RRSGWQLVFV  780
DRENDILLLG DDPWEAFVNN VWYIKILTPE DVQKMGEQGL ESFSPNVGQR IE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein