PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021647090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 739aa MW: 83818.6 Da PI: 6.5101 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.5 | 5.8e-19 | 139 | 235 | 5 | 95 |
-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 5 ltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 lt+s+v +g l++ k+fae++ ++++e ++ l +d++g++W++k+ +r+k+++ ++lt+GWk+F+k+++L+ gD ++F + ++++ XP_021647090.1 139 LTRSNVQPHGTLSIKKDFAEKClppleilESQEEAHQYLFATDLQGKEWRFKHVFRGKPNKrHLLTEGWKDFAKSKKLEKGDELIFL--RGETGQ 231 78999************************88999999******************9999888************************9..337777 PP .EEE CS B3 92 lvvk 95 l+++ XP_021647090.1 232 LLIG 235 7776 PP | |||||||
2 | Auxin_resp | 70.4 | 5.7e-24 | 264 | 343 | 3 | 83 |
Auxin_resp 3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a++ ++ F+ Y+Pra + eF+v+v+k+++a ++++s+G+Rf m+fe ++ +++ Gt++g d +++rW S+Wrs+k XP_021647090.1 264 MAIDRGTSFSFNYKPRANRCEFMVNVNKYLEAQNHNLSIGTRFSMRFEVGKVH-KSFIGTIAGFDDNESSRWVSSQWRSIK 343 6789999******************************************9775.688*********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 739 aa Download sequence |
MVNHWSEPHP PESDIQNSIW TVNNSAAAHL FENGDTIKKE LFDICAGITL PCRGQQVYYF 60 PQGYIEQFMN KEIELPFELP SKILCEVSNA YYKAIQKTDQ IVGEITLAPL TNRREVTSSP 120 NPQPLAAERP AVHSYRMRLT RSNVQPHGTL SIKKDFAEKC LPPLEILESQ EEAHQYLFAT 180 DLQGKEWRFK HVFRGKPNKR HLLTEGWKDF AKSKKLEKGD ELIFLRGETG QLLIGLKKLK 240 DTDDKFSVIS LENKCVGALT RAHMAIDRGT SFSFNYKPRA NRCEFMVNVN KYLEAQNHNL 300 SIGTRFSMRF EVGKVHKSFI GTIAGFDDNE SSRWVSSQWR SIKVNWDKAS PFLPRRVSPW 360 ELEPTSNSQI IQSSKRALHT VGFAQHISCQ RRRIEGELNK SCSCINKVES SYDDDTSGAN 420 KEGNIEGSTK RNESGNIECP DSELDKLHSN FCWEQNSPGL SPTEFGNLSP DLREFRNSPP 480 LVFQSNECTT LPLTEFEISL QPPQVASTSQ GSLIRTFQES CGPAERNRFG NIECPHEFDM 540 DNFCWAQNSP SLPLVDRTRP PTEISCQQPQ LARTSQGHMI GTSYNMDCKV DFHSFRISSH 600 VIPYLESIYS KIGNFWRESE VESASIMEAT LEELGKALYL MMKDGNLVSL NTEELKTIKS 660 KIKDATVVGF KLDCLQSIVR KAEAVLRAKD QCHSLEEQKS SLESQLRGVE SEHQNAEGEL 720 KNCQQELGSL VSDIFLSFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 4e-90 | ARF family protein |