PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647088.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 739aa MW: 83818.6 Da PI: 6.5101

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.8e-19	139	235	5	95
-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 5 ltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 lt+s+v +g l++ k+fae++ ++++e ++ l +d++g++W++k+ +r+k+++ ++lt+GWk+F+k+++L+ gD ++F + ++++ XP_021647088.1 139 LTRSNVQPHGTLSIKKDFAEKClppleilESQEEAHQYLFATDLQGKEWRFKHVFRGKPNKrHLLTEGWKDFAKSKKLEKGDELIFL--RGETGQ 231 78999**********************88999999**************9999888**********************9..337777 PP .EEE CS B3 92 lvvk 95 l+++ XP_021647088.1 232 LLIG 235 7776 PP
2	Auxin_resp	70.4	5.7e-24	264	343	3	83
Auxin_resp 3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a++ ++ F+ Y+Pra + eF+v+v+k+++a ++++s+G+Rf m+fe ++ +++ Gt++g d +++rW S+Wrs+k XP_021647088.1 264 MAIDRGTSFSFNYKPRANRCEFMVNVNKYLEAQNHNLSIGTRFSMRFEVGKVH-KSFIGTIAGFDDNESSRWVSSQWRSIK 343 6789999****************************************9775.688*******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MVNHWSEPHP PESDIQNSIW TVNNSAAAHL FENGDTIKKE LFDICAGITL PCRGQQVYYF 60 PQGYIEQFMN KEIELPFELP SKILCEVSNA YYKAIQKTDQ IVGEITLAPL TNRREVTSSP 120 NPQPLAAERP AVHSYRMRLT RSNVQPHGTL SIKKDFAEKC LPPLEILESQ EEAHQYLFAT 180 DLQGKEWRFK HVFRGKPNKR HLLTEGWKDF AKSKKLEKGD ELIFLRGETG QLLIGLKKLK 240 DTDDKFSVIS LENKCVGALT RAHMAIDRGT SFSFNYKPRA NRCEFMVNVN KYLEAQNHNL 300 SIGTRFSMRF EVGKVHKSFI GTIAGFDDNE SSRWVSSQWR SIKVNWDKAS PFLPRRVSPW 360 ELEPTSNSQI IQSSKRALHT VGFAQHISCQ RRRIEGELNK SCSCINKVES SYDDDTSGAN 420 KEGNIEGSTK RNESGNIECP DSELDKLHSN FCWEQNSPGL SPTEFGNLSP DLREFRNSPP 480 LVFQSNECTT LPLTEFEISL QPPQVASTSQ GSLIRTFQES CGPAERNRFG NIECPHEFDM 540 DNFCWAQNSP SLPLVDRTRP PTEISCQQPQ LARTSQGHMI GTSYNMDCKV DFHSFRISSH 600 VIPYLESIYS KIGNFWRESE VESASIMEAT LEELGKALYL MMKDGNLVSL NTEELKTIKS 660 KIKDATVVGF KLDCLQSIVR KAEAVLRAKD QCHSLEEQKS SLESQLRGVE SEHQNAEGEL 720 KNCQQELGSL VSDIFLSFI

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MVNHWSEPHP PESDIQNSIW TVNNSAAAHL FENGDTIKKE LFDICAGITL PCRGQQVYYF  60
PQGYIEQFMN KEIELPFELP SKILCEVSNA YYKAIQKTDQ IVGEITLAPL TNRREVTSSP  120
NPQPLAAERP AVHSYRMRLT RSNVQPHGTL SIKKDFAEKC LPPLEILESQ EEAHQYLFAT  180
DLQGKEWRFK HVFRGKPNKR HLLTEGWKDF AKSKKLEKGD ELIFLRGETG QLLIGLKKLK  240
DTDDKFSVIS LENKCVGALT RAHMAIDRGT SFSFNYKPRA NRCEFMVNVN KYLEAQNHNL  300
SIGTRFSMRF EVGKVHKSFI GTIAGFDDNE SSRWVSSQWR SIKVNWDKAS PFLPRRVSPW  360
ELEPTSNSQI IQSSKRALHT VGFAQHISCQ RRRIEGELNK SCSCINKVES SYDDDTSGAN  420
KEGNIEGSTK RNESGNIECP DSELDKLHSN FCWEQNSPGL SPTEFGNLSP DLREFRNSPP  480
LVFQSNECTT LPLTEFEISL QPPQVASTSQ GSLIRTFQES CGPAERNRFG NIECPHEFDM  540
DNFCWAQNSP SLPLVDRTRP PTEISCQQPQ LARTSQGHMI GTSYNMDCKV DFHSFRISSH  600
VIPYLESIYS KIGNFWRESE VESASIMEAT LEELGKALYL MMKDGNLVSL NTEELKTIKS  660
KIKDATVVGF KLDCLQSIVR KAEAVLRAKD QCHSLEEQKS SLESQLRGVE SEHQNAEGEL  720
KNCQQELGSL VSDIFLSFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	4e-90	ARF family protein