PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021647084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 260aa MW: 29442.9 Da PI: 9.0409 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.1 | 9.1e-15 | 87 | 145 | 36 | 96 |
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 l +d++g+ W++k+ +r++++r++lt+GWk F+++++L gD++ F + +++ l+v++ XP_021647084.1 87 LDATDLQGNNWRFKHVFRGTPKRHLLTEGWKAFASSKKLAKGDVLNFL--RGETGPLLVGL 145 56789******************************************9..34788778775 PP | |||||||
2 | Auxin_resp | 77 | 4.7e-26 | 175 | 254 | 3 | 83 |
Auxin_resp 3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a++ +++F+ +Y+Pr +seF+v+v+k+++a + ++ +G+ f m++e+e++ e+r++G +vg +d ++W +S+Wrs+k XP_021647084.1 175 MAIKIGTPFHFIYKPRENKSEFMVNVNKYLEAQNLNFPIGTSFSMRLEGEEVLEQRFTGHIVGSQDN-VSSWAGSEWRSIK 254 688999************************************************************5.55********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDYSTVARPH ANYGDALKKK ILDICAGGTL PCRGEQFYYF PEGHIEKLGG PMVRGLELPF 60 ELPSKILCEV MNVYHMELSE EVPYQYLDAT DLQGNNWRFK HVFRGTPKRH LLTEGWKAFA 120 SSKKLAKGDV LNFLRGETGP LLVGLKKLMK QDTNGTPSIK SLKDKCVGTL SSAFMAIKIG 180 TPFHFIYKPR ENKSEFMVNV NKYLEAQNLN FPIGTSFSMR LEGEEVLEQR FTGHIVGSQD 240 NVSSWAGSEW RSIKVHVYLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 1e-57 | ARF family protein |