PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647083.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 324aa    MW: 36608 Da    PI: 8.4556
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.84e-18111209196
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f  +lt sd +++g l++ ++ ae++       ++++ +   l  +d++g+ W++k+ +r++++r++lt+GWk F+++++L  gD++ F   + +
  XP_021647083.1 111 FHRTLTASDISNHGSLYINRHDAENClpplelsEEVPYQ--YLDATDLQGNNWRFKHVFRGTPKRHLLTEGWKAFASSKKLAKGDVLNFL--RGE 201
                     77899******************999****766555445..69999*******************************************9..347 PP

                     EE..EEEE CS
              B3  89 efelvvkv 96 
                     ++ l+v++
  XP_021647083.1 202 TGPLLVGL 209
                     88778775 PP
2Auxin_resp76.57.1e-26239318383
      Auxin_resp   3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                      a++ +++F+ +Y+Pr  +seF+v+v+k+++a + ++ +G+ f m++e+e++ e+r++G +vg +d   ++W +S+Wrs+k
  XP_021647083.1 239 MAIKIGTPFHFIYKPRENKSEFMVNVNKYLEAQNLNFPIGTSFSMRLEGEEVLEQRFTGHIVGSQDN-VSSWAGSEWRSIK 318
                     688999************************************************************5.55********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDYSTVARPH ANYGDALKKK ILDICAGGTL PCRGEQFYYF PEGHIEKLGG PMVRGLELPF  60
ELPSKILCEV MNVYHMAEPE TDQISVEITL VHVKNQRKVT SPNPQLLVHS FHRTLTASDI  120
SNHGSLYINR HDAENCLPPL ELSEEVPYQY LDATDLQGNN WRFKHVFRGT PKRHLLTEGW  180
KAFASSKKLA KGDVLNFLRG ETGPLLVGLK KLMKQDTNGT PSIKSLKDKC VGTLSSAFMA  240
IKIGTPFHFI YKPRENKSEF MVNVNKYLEA QNLNFPIGTS FSMRLEGEEV LEQRFTGHIV  300
GSQDNVSSWA GSEWRSIKVH VYLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-103ARF family protein