PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021647076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | GRF | ||||||||
Protein Properties | Length: 339aa MW: 36889.8 Da PI: 8.4736 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.5 | 6.7e-25 | 95 | 139 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_021647076.1 95 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 139 79****************************************986 PP | |||||||
2 | QLQ | 65 | 1.8e-22 | 33 | 69 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_021647076.1 33 SPFTVSQWQELEHQALIFKYMMAGVPVPPDLVLPIQK 69 89*********************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 339 aa Download sequence |
MNSGAVGGVG GGGGAGPGAV TGGMGTGVLA MRSPFTVSQW QELEHQALIF KYMMAGVPVP 60 PDLVLPIQKS FESISHRFFH HPTVGYCSFY GKKVDPEPGR CRRTDGKKWR CSKDAYPDSK 120 YCERHMHRGR NRSRKPVESQ TLTQSSSTVA SLTVTGSSSG TGSFQNLPLH AFGNLQGTGS 180 GTNQSHYNMD SIPYGIPSKD YRCGQVLKPE VGEHSFFSGA SGSNRVLQTD SQLDSAWPWM 240 QSRVSSFPTS KSIDNSMLQN DYPQHSFFSG EFATGEPAKQ GGQSLRPFFD EWPKTRDSWS 300 GFEDDRSNPT SFSTTRLSIS TPMASSDMST PSSHSPHDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-46 | GRF family protein |