PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646672.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 495aa MW: 55084 Da PI: 5.6194

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.6	5.4e-35	26	116	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++e++sws+n+nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++++ll++ XP_021646672.1 26 FLLKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFVKDQNHLLKN 111 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_021646672.1 112 IHRRK 116 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MEVVPASTSS AAAGGGGGGG GGPAPFLLKT YDMVDDSSTD EIVSWSSNKN SFVVWNPPEF 60 ARLLLPTYFK HNNFSSFIRQ LNTYGFRKID PERWEFANED FVKDQNHLLK NIHRRKPIHS 120 HSHPQGSLVD PERAAFEEEI DRLARDKAAL EASVVVSKQQ RSAEKLQLED LTQRVDSMEQ 180 RQEKLMTCLE KAVQKPTFIE HLGRKIDSMD FSAYNKKRRL PQVDPLKSIA ENSFVDNHSC 240 SRPEFGNVIH QDFSNKLRLE LSTAVSDVNL VSNSTQSSNE DGGSPQRKIA EVDPKDAPTG 300 TSCLLFAAET FELSDTGTSY TFKVDPSFPR KVTVNETPGL HLLQQNLTSN EEVDGHISCH 360 LNLTLASSTL QVNRSPYPAR MPELHQEICK SAKSKFNDNG KESDMMVTSK VRNAGDEDTI 420 LSSSKEAPSS NQGPAAAPAQ VNDVFWEQFL TERPGSSENE DASSNSRSNP YDEQEDRRSS 480 HGVVRNVKNV EHLSL

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MEVVPASTSS AAAGGGGGGG GGPAPFLLKT YDMVDDSSTD EIVSWSSNKN SFVVWNPPEF  60
ARLLLPTYFK HNNFSSFIRQ LNTYGFRKID PERWEFANED FVKDQNHLLK NIHRRKPIHS  120
HSHPQGSLVD PERAAFEEEI DRLARDKAAL EASVVVSKQQ RSAEKLQLED LTQRVDSMEQ  180
RQEKLMTCLE KAVQKPTFIE HLGRKIDSMD FSAYNKKRRL PQVDPLKSIA ENSFVDNHSC  240
SRPEFGNVIH QDFSNKLRLE LSTAVSDVNL VSNSTQSSNE DGGSPQRKIA EVDPKDAPTG  300
TSCLLFAAET FELSDTGTSY TFKVDPSFPR KVTVNETPGL HLLQQNLTSN EEVDGHISCH  360
LNLTLASSTL QVNRSPYPAR MPELHQEICK SAKSKFNDNG KESDMMVTSK VRNAGDEDTI  420
LSSSKEAPSS NQGPAAAPAQ VNDVFWEQFL TERPGSSENE DASSNSRSNP YDEQEDRRSS  480
HGVVRNVKNV EHLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-176	HSF family protein