PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646449.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 423aa MW: 45567 Da PI: 6.5825

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	30.9	8.8e-10	40	92	19	73
TCP 19 dRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssasec 73 +RvR++ c + L +eLG+ +d++t++WL+ +a p+ +t + s + XP_021646449.1 40 NKRVRIPPICVPAICRLKQELGLRSDGETVQWLIHEARPQLVPATISpphS-----RP 92 58******************************************9994321.....22 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MEIVQVHPSS EASEADPTQQ PPVKTTRRRC FTGDGPIPAN KRVRIPPICV PAICRLKQEL 60 GLRSDGETVQ WLIHEARPQL VPATISPPHS RPSSNALNHS LPKPLCMEYL NEDKLASYLP 120 VATAGGTSAI KPVRATVVQA STVLFDTPAT LDKAERLIAG AAAYGSQMVV FPEAFLGGHP 180 RYMATDVDLQ KYSASAIDVP VHLVMGVVER DGLYLFSTIL FFDSMGQHLG HHRKLMPMAS 240 ESAVWFSGEK TSLPVYKTTI GKVGGLVSWD NKSPLLRTEL YAKGVEIYCI PSADAREIWK 300 ASMIHVAVEG GCFVLSANQF SRGRDSPLPL GNSDSDTALD EITSAGGSLI VSPSGTILAG 360 PNYQGECLIS ADMDLEEIAR AKTEFGGVRN NLNPNHVGWT TSGSNPISLA TDVKAEVPKQ 420 LSW

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MEIVQVHPSS EASEADPTQQ PPVKTTRRRC FTGDGPIPAN KRVRIPPICV PAICRLKQEL  60
GLRSDGETVQ WLIHEARPQL VPATISPPHS RPSSNALNHS LPKPLCMEYL NEDKLASYLP  120
VATAGGTSAI KPVRATVVQA STVLFDTPAT LDKAERLIAG AAAYGSQMVV FPEAFLGGHP  180
RYMATDVDLQ KYSASAIDVP VHLVMGVVER DGLYLFSTIL FFDSMGQHLG HHRKLMPMAS  240
ESAVWFSGEK TSLPVYKTTI GKVGGLVSWD NKSPLLRTEL YAKGVEIYCI PSADAREIWK  300
ASMIHVAVEG GCFVLSANQF SRGRDSPLPL GNSDSDTALD EITSAGGSLI VSPSGTILAG  360
PNYQGECLIS ADMDLEEIAR AKTEFGGVRN NLNPNHVGWT TSGSNPISLA TDVKAEVPKQ  420
LSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45150.1	8e-11	TCP family protein