PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646447.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 438aa MW: 47094.8 Da PI: 6.7343

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	30.9	9.4e-10	40	92	19	73
TCP 19 dRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssasec 73 +RvR++ c + L +eLG+ +d++t++WL+ +a p+ +t + s + XP_021646447.1 40 NKRVRIPPICVPAICRLKQELGLRSDGETVQWLIHEARPQLVPATISpphS-----RP 92 58******************************************9994321.....22 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MEIVQVHPSS EASEADPTQQ PPVKTTRRRC FTGDGPIPAN KRVRIPPICV PAICRLKQEL 60 GLRSDGETVQ WLIHEARPQL VPATISPPHS RPSSNALNHS LPKPLCMEYL NEDKLASYLP 120 VATAGGTSAI KPVRATVVQA STVLFDTPAT LDKAERLIAG AAAYGSQMVV FPEAFLGGHP 180 RYMATDVDLQ KYSASAIDVP GPEVDGLAKI AGKYKVHLVM GVVERDGLYL FSTILFFDSM 240 GQHLGHHRKL MPMASESAVW FSGEKTSLPV YKTTIGKVGG LVSWDNKSPL LRTELYAKGV 300 EIYCIPSADA REIWKASMIH VAVEGGCFVL SANQFSRGRD SPLPLGNSDS DTALDEITSA 360 GGSLIVSPSG TILAGPNYQG ECLISADMDL EEIARAKTEF GGVRNNLNPN HVGWTTSGSN 420 PISLATDVKA EVPKQLSW

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MEIVQVHPSS EASEADPTQQ PPVKTTRRRC FTGDGPIPAN KRVRIPPICV PAICRLKQEL  60
GLRSDGETVQ WLIHEARPQL VPATISPPHS RPSSNALNHS LPKPLCMEYL NEDKLASYLP  120
VATAGGTSAI KPVRATVVQA STVLFDTPAT LDKAERLIAG AAAYGSQMVV FPEAFLGGHP  180
RYMATDVDLQ KYSASAIDVP GPEVDGLAKI AGKYKVHLVM GVVERDGLYL FSTILFFDSM  240
GQHLGHHRKL MPMASESAVW FSGEKTSLPV YKTTIGKVGG LVSWDNKSPL LRTELYAKGV  300
EIYCIPSADA REIWKASMIH VAVEGGCFVL SANQFSRGRD SPLPLGNSDS DTALDEITSA  360
GGSLIVSPSG TILAGPNYQG ECLISADMDL EEIARAKTEF GGVRNNLNPN HVGWTTSGSN  420
PISLATDVKA EVPKQLSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45150.1	8e-11	TCP family protein