PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021645974.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 298aa MW: 33056.7 Da PI: 9.2748 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.6 | 2.8e-10 | 94 | 118 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC+ f++ GtC+y +C+FaH+ XP_021645974.1 94 FKTKLCCKFRA-GTCPYVTNCNFAHS 118 69*********.*************8 PP | |||||||
2 | zf-CCCH | 18.9 | 2.7e-06 | 166 | 191 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 yk + C+ f+ C+yGd+C+F H+ XP_021645974.1 166 YKGRHCKKFYTEEGCPYGDNCTFLHD 191 78888********************7 PP | |||||||
3 | zf-CCCH | 42.6 | 1e-13 | 232 | 257 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt++C+ + tG+C++G++C+FaHg XP_021645974.1 232 WKTRICNKWELTGYCPFGSKCHFAHG 257 8************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MDYGRDFSSA NVVHVIPGTG PENWFPNSTD SSSVWATEDD YHAWNNFDSP SDSTPSNSNF 60 QSSHTRSGSE PPNKKSKNNS QELTSKKSIG KMFFKTKLCC KFRAGTCPYV TNCNFAHSIE 120 ELRRPPSNWQ EIVAAHEEDK GNIMEIREEF QIPSIGGFGG DSQRSYKGRH CKKFYTEEGC 180 PYGDNCTFLH DEQSKNRESV AISLGPGGYG GVTGGGGTSG SASGGNVKPS NWKTRICNKW 240 ELTGYCPFGS KCHFAHGAGG RKHLKNVRMS IRFNRLVNKS RKGNLKNLER GKKHICFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 1e-92 | C3H family protein |