PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645785.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 544aa MW: 59876.8 Da PI: 6.6834

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.1	1.2e-14	167	225	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021645785.1 167 IFRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 225 69****************666664477446***********************98 PP
2	AP2	47.1	5.9e-15	270	319	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021645785.1 270 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 319 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MNSNNWLSFP LSPTHSSLPN HLHAPHPQQF SLGLVTENLD NPFQTQEWSL INTQGGSEVP 60 KVADFLGVTK SENQSDLVAF NEIQANVSDY MFPGNSLVPV QNTVLAASGN YEFPENANNL 120 QSLTLSMGGA SGKVSSTCET SGDTSTNTVE AATPRRTLDT FGQRTSIFRG VTRHRWTGRY 180 EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDLAA LKYWGTSTTT NFPISNYEKE 240 LEEMKHMTRQ EFVASIRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF 300 STEEEAAEAY DIAAIKFRGL NAVTNFDMNR YDVKSILESN TLPIGGGAAK RLKEAQAIES 360 SRKREEMIAL GSGFQYGSSS SSRLQAYSLT QAPFEQPQPL LTLQNQDISQ YAQDASFHQN 420 FLQTQLHLHQ QSAGTNYLQQ SSQNPQFYNS YIQNNPALLH GLFNMGSSSS IMEHNGSSSG 480 SYSGGYLGNG LGIASNSSGS NVVGSAEEVA FVKVDYDMPS ASYGSWSGDS VQGSNPGLFT 540 MWND

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MNSNNWLSFP LSPTHSSLPN HLHAPHPQQF SLGLVTENLD NPFQTQEWSL INTQGGSEVP  60
KVADFLGVTK SENQSDLVAF NEIQANVSDY MFPGNSLVPV QNTVLAASGN YEFPENANNL  120
QSLTLSMGGA SGKVSSTCET SGDTSTNTVE AATPRRTLDT FGQRTSIFRG VTRHRWTGRY  180
EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDLAA LKYWGTSTTT NFPISNYEKE  240
LEEMKHMTRQ EFVASIRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF  300
STEEEAAEAY DIAAIKFRGL NAVTNFDMNR YDVKSILESN TLPIGGGAAK RLKEAQAIES  360
SRKREEMIAL GSGFQYGSSS SSRLQAYSLT QAPFEQPQPL LTLQNQDISQ YAQDASFHQN  420
FLQTQLHLHQ QSAGTNYLQQ SSQNPQFYNS YIQNNPALLH GLFNMGSSSS IMEHNGSSSG  480
SYSGGYLGNG LGIASNSSGS NVVGSAEEVA FVKVDYDMPS ASYGSWSGDS VQGSNPGLFT  540
MWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein