PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645743.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 444aa MW: 48362.1 Da PI: 7.0186

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.9e-16	213	259	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRRdriN+++ L++l+P+a K +Ka++L +++eY+k+Lq XP_021645743.1 213 VHNQSEQRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIEYVKQLQ 259 5***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MGISPAAAAE LCFSSILAAA FFQQQMGLLS RSNSYEVAEL TWENGQPAMH GLGGLLHSSQ 60 ATKATWGRTS ETLESIVHQA ASCHSTQQNI NSNHHQEPAK IASAVASSDG KWAETSSGQQ 120 QAQMDPSIKK RARSESNQYC RSNRDHEHVD RSACASASPI TTYASFESTP SYKAKTTDNE 180 DSSSHGGSEN QYEDRETKTI RSDSSRRSRV AAVHNQSEQR RRDRINQKMK ALQKLVPNAS 240 KTDKASMLDE VIEYVKQLQA QVQVMSVRNM PQMMMPLGMQ QHLHQMSLLA RMGMGVTHLG 300 LGMGMLHDMS TIGHTTTAPP LLHPAPPAAT AAAAAFAPPP PHPFVVPSMI PAANPDPAAN 360 SSAPLPDPYC SFLARSMNME LYNNMAALYQ QTTQAASGPS QPNHPQGSER CFNRTVSFLL 420 DEETSFLLIT GISGFWIPEP REDT

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MGISPAAAAE LCFSSILAAA FFQQQMGLLS RSNSYEVAEL TWENGQPAMH GLGGLLHSSQ  60
ATKATWGRTS ETLESIVHQA ASCHSTQQNI NSNHHQEPAK IASAVASSDG KWAETSSGQQ  120
QAQMDPSIKK RARSESNQYC RSNRDHEHVD RSACASASPI TTYASFESTP SYKAKTTDNE  180
DSSSHGGSEN QYEDRETKTI RSDSSRRSRV AAVHNQSEQR RRDRINQKMK ALQKLVPNAS  240
KTDKASMLDE VIEYVKQLQA QVQVMSVRNM PQMMMPLGMQ QHLHQMSLLA RMGMGVTHLG  300
LGMGMLHDMS TIGHTTTAPP LLHPAPPAAT AAAAAFAPPP PHPFVVPSMI PAANPDPAAN  360
SSAPLPDPYC SFLARSMNME LYNNMAALYQ QTTQAASGPS QPNHPQGSER CFNRTVSFLL  420
DEETSFLLIT GISGFWIPEP REDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	6e-35	bHLH family protein