PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645500.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 479aa MW: 53817.4 Da PI: 8.0411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.2e-14	295	341	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ Er+RR+r+++++++Lr l+Pk + K++Ka+iL A++YI +Lq XP_021645500.1 295 KNLVTERNRRNRMKDGLFTLRALVPKiS------KMNKAAILGDAIDYIGELQ 341 55678*******************66......**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MRGLEGALEW LRPLVHSNAW DYCVVWKLGD DPSRFIQWMG CCCGGGGGEV KEERGEENHS 60 AALCRDMYFK HPISTKACEA LACFPPFMPL YSGIHGEVVT STQSKWLTHA NASDSNLSPE 120 FVGTRVLIPV FGGLIELFAG KHITKDQKII EFITAQFNVL KQEALIAHDY SSINELCLDP 180 FLEQNLQNLP PPSHLLSLIP RTQFHHPLNQ PNNHSSFEGS SSVSNPSNEH SSFDSHSGHL 240 SRKGILKQSI GKPCGKRKSD YDENLLKQQA GLFPDCNNKA AKVIQRSERE NFRSKNLVTE 300 RNRRNRMKDG LFTLRALVPK ISKMNKAAIL GDAIDYIGEL QKEEKKLQDE LKEIEEQECK 360 NSNAEIIASK LETLCESSKH LLPPEGNQNS SGFGENKKTE VQIELNQIGK REFLIKLFYE 420 HKRGGFRKLM DAIYSFGLQV VDANMTTFNG KVLNILKVEA NAKDIQPRKL KESLLKLGG

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MRGLEGALEW LRPLVHSNAW DYCVVWKLGD DPSRFIQWMG CCCGGGGGEV KEERGEENHS  60
AALCRDMYFK HPISTKACEA LACFPPFMPL YSGIHGEVVT STQSKWLTHA NASDSNLSPE  120
FVGTRVLIPV FGGLIELFAG KHITKDQKII EFITAQFNVL KQEALIAHDY SSINELCLDP  180
FLEQNLQNLP PPSHLLSLIP RTQFHHPLNQ PNNHSSFEGS SSVSNPSNEH SSFDSHSGHL  240
SRKGILKQSI GKPCGKRKSD YDENLLKQQA GLFPDCNNKA AKVIQRSERE NFRSKNLVTE  300
RNRRNRMKDG LFTLRALVPK ISKMNKAAIL GDAIDYIGEL QKEEKKLQDE LKEIEEQECK  360
NSNAEIIASK LETLCESSKH LLPPEGNQNS SGFGENKKTE VQIELNQIGK REFLIKLFYE  420
HKRGGFRKLM DAIYSFGLQV VDANMTTFNG KVLNILKVEA NAKDIQPRKL KESLLKLGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	3e-37	bHLH family protein