PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645189.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 610aa MW: 70096.6 Da PI: 7.109

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.6	8.4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_021645189.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + + vg+kktLv+y+grap+g +t Wvmheyrl XP_021645189.1 100 S-HMRSVGMKKTLVYYRGRAPHGARTGWVMHEYRL 133 9.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS HMRSVGMKKT LVYYRGRAPH 120 GARTGWVMHE YRLDERECET ASGLQDAYAL CRVFKKSVNM PKIGEHFAST SNQMASEHSS 180 SIELYSEGRC EDYESSNYPM PIDTCSLSIA NNGSPLHLGE TRDEKWKHFL SEDAFTFSSP 240 SFSSFGTVPY PPSKVDIALE CARLQHRFSL PPLEVEDFPQ VGPVDLKVMH ENTNPTDILQ 300 EILSVAHASQ ELTNQTNLQD TWGRNYIADN NDFTFLAGND THGHLYSDIN SMRCMDKSWV 360 DPNLRFVEIG NLDEDFKTER VTENLRWVGM SNEELQKSFI EEQKVVPIEN ISTFQIREEK 420 ELQGSPSFEV VKEIKVNHGM FVSTRQAAET FFHQLVPSQT VKIHLNPAEM IADTFSIQKI 480 DMHSALDEPI KSNINTFSRA NNFMEIRESL HPWKKFGTTV VGMIVILLMH CFYVGNENKL 540 RMHGLRENGN VKPRRKAERN KWNNDHKEKN LLVSIRGGNQ FSVFLKKFGL FLTISLAVCT 600 MWVNHVILAY

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS HMRSVGMKKT LVYYRGRAPH  120
GARTGWVMHE YRLDERECET ASGLQDAYAL CRVFKKSVNM PKIGEHFAST SNQMASEHSS  180
SIELYSEGRC EDYESSNYPM PIDTCSLSIA NNGSPLHLGE TRDEKWKHFL SEDAFTFSSP  240
SFSSFGTVPY PPSKVDIALE CARLQHRFSL PPLEVEDFPQ VGPVDLKVMH ENTNPTDILQ  300
EILSVAHASQ ELTNQTNLQD TWGRNYIADN NDFTFLAGND THGHLYSDIN SMRCMDKSWV  360
DPNLRFVEIG NLDEDFKTER VTENLRWVGM SNEELQKSFI EEQKVVPIEN ISTFQIREEK  420
ELQGSPSFEV VKEIKVNHGM FVSTRQAAET FFHQLVPSQT VKIHLNPAEM IADTFSIQKI  480
DMHSALDEPI KSNINTFSRA NNFMEIRESL HPWKKFGTTV VGMIVILLMH CFYVGNENKL  540
RMHGLRENGN VKPRRKAERN KWNNDHKEKN LLVSIRGGNQ FSVFLKKFGL FLTISLAVCT  600
MWVNHVILAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-168	NAC family protein