PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644943.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 458aa MW: 49747.4 Da PI: 8.6109

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87	1.7e-27	124	181	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vk+s +rsYYrC++++C++kkk++r+++ ++++i+Y g+Hnh+ XP_021644943.1 124 SDGYSWRKYGQKQVKSSSSSRSYYRCAFSNCHAKKKIQRCHHSSRIIDIVYIGHHNHD 181 7********************************************************7 PP
2	WRKY	93.8	1.2e-29	321	378	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+ + rsYYrCts gC+++k+ver+++d ++ +itYeg+H+h+ XP_021644943.1 321 SDGYRWRKYGQKMVKGNSHIRSYYRCTSGGCSARKHVERATDDATTSTITYEGKHDHD 378 7********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MSCSGGKGES RAPYSNVSVC DCPSFSNLLK SVLTTNSSTF RFQGQHETPQ QDNVVSKKPK 60 EDGAKLELQA ECANPSTGIS PLAPAATSLP HSAPVIPTSG LIVDQQNADC NTCLSHIVRE 120 TPASDGYSWR KYGQKQVKSS SSSRSYYRCA FSNCHAKKKI QRCHHSSRII DIVYIGHHNH 180 DLSQNKCNVS RASVASSKLA AGSNIVDSIQ KVDGADMSIC WEDTRQSSVH IAESEQQSSS 240 SSTGDIRIKV EEHNGNELDS KKFGAEHQKN SSCGIANAEV QEKHGAEPRL KKRSAYSAPV 300 LEANKEIKIV VHTTADGGIS SDGYRWRKYG QKMVKGNSHI RSYYRCTSGG CSARKHVERA 360 TDDATTSTIT YEGKHDHDMP IPKKQKGSES LGLISSSATS NGAHCKKTKT LSSQRISAKW 420 SVDREGDLMD EKVLELGGEK ALESAQTLLS IGIELRPC

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MSCSGGKGES RAPYSNVSVC DCPSFSNLLK SVLTTNSSTF RFQGQHETPQ QDNVVSKKPK  60
EDGAKLELQA ECANPSTGIS PLAPAATSLP HSAPVIPTSG LIVDQQNADC NTCLSHIVRE  120
TPASDGYSWR KYGQKQVKSS SSSRSYYRCA FSNCHAKKKI QRCHHSSRII DIVYIGHHNH  180
DLSQNKCNVS RASVASSKLA AGSNIVDSIQ KVDGADMSIC WEDTRQSSVH IAESEQQSSS  240
SSTGDIRIKV EEHNGNELDS KKFGAEHQKN SSCGIANAEV QEKHGAEPRL KKRSAYSAPV  300
LEANKEIKIV VHTTADGGIS SDGYRWRKYG QKMVKGNSHI RSYYRCTSGG CSARKHVERA  360
TDDATTSTIT YEGKHDHDMP IPKKQKGSES LGLISSSATS NGAHCKKTKT LSSQRISAKW  420
SVDREGDLMD EKVLELGGEK ALESAQTLLS IGIELRPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	6e-59	WRKY family protein