PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644824.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 337aa    MW: 38437.7 Da    PI: 5.2485
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.8e-1789136148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT eEd +l ++v+ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_021644824.1  89 KGPWTVEEDAILTEYVAIHGEGRWNAAARCAGLKRTGKSCRLRWLNYL 136
                      79********************************************97 PP

2Myb_DNA-binding48.32.3e-15142185146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_021644824.1 142 RGNITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 185
                      7899******************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MVVLFSLLVD VFNSPLTIYT YKLLIICPSL TPTPHLLYLP SQICNSHSHL SLSLSLGLCL  60
LILIEEMGAQ VRNYDCATYK NEEDTDMRKG PWTVEEDAIL TEYVAIHGEG RWNAAARCAG  120
LKRTGKSCRL RWLNYLRPDV RRGNITLQEQ LLILELHSRW GNRWSKIAQY LPGRTDNEIK  180
NYWRTRVQKQ AKQLKCDVNS KQFRDAMRYI WMPRLVERIR AATGSSAGQS TAYSSCSSNH  240
NDIPANSEAA QINDAMMEWV MPEPSGNSLE SLDTQVSPVS DVTEYQNPTS MQNGLGLYPE  300
DESDRWAEME MQMQSSILGG GEALESLWNE ENIWFLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-76MYB family protein