PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021644824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 337aa MW: 38437.7 Da PI: 5.2485 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.8e-17 | 89 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l ++v+ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021644824.1 89 KGPWTVEEDAILTEYVAIHGEGRWNAAARCAGLKRTGKSCRLRWLNYL 136 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 142 | 185 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021644824.1 142 RGNITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 185 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MVVLFSLLVD VFNSPLTIYT YKLLIICPSL TPTPHLLYLP SQICNSHSHL SLSLSLGLCL 60 LILIEEMGAQ VRNYDCATYK NEEDTDMRKG PWTVEEDAIL TEYVAIHGEG RWNAAARCAG 120 LKRTGKSCRL RWLNYLRPDV RRGNITLQEQ LLILELHSRW GNRWSKIAQY LPGRTDNEIK 180 NYWRTRVQKQ AKQLKCDVNS KQFRDAMRYI WMPRLVERIR AATGSSAGQS TAYSSCSSNH 240 NDIPANSEAA QINDAMMEWV MPEPSGNSLE SLDTQVSPVS DVTEYQNPTS MQNGLGLYPE 300 DESDRWAEME MQMQSSILGG GEALESLWNE ENIWFLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 1e-76 | MYB family protein |