PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644486.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 338aa MW: 37185.3 Da PI: 8.2894

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdellv+++k+ G g+W+t +++ g+ R++k+c++rw +yl XP_021644486.1 33 RGPWTPEEDELLVNYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 80 89****************************99**********97 PP
2	Myb_DNA-binding	46.9	6.4e-15	91	131	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_021644486.1 91 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 131 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MRNPSTATSA GGGPQAATTT AKTPCCSKVG LKRGPWTPEE DELLVNYIKK EGEGRWRTLP 60 KRAGLLRCGK SCRLRWMNYL RPCVKRGQIA PDEEDLILRL HRLLGNRWSL IAGRIPGRTD 120 NEIKNYWNTH LSKKLISQGI DPRTHKPLKP ESVDHHKASS SKANRKTSSP KSNNNNPAGA 180 AASSGVEETN SGGSTQIISN EQNLYIENTS LDHHYHINGN NNNASHGYSS LLNCGDGTCG 240 MYLRSNVQGL NNEEDEDINY GTDDVFSSFL NSIINEEAFT SQQHQQMQQQ ADLIVPSSDP 300 LVSISTASTI GGGSSWESVL MSSTFNRNDP IKKVNDHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	5e-78	MYB family protein