PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644340.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 383aa    MW: 41551.3 Da    PI: 7.9959
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.71.2e-4191167278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     C v+gC++dls++++yhrrhkvCe hsk+p+v+++g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+
  XP_021644340.1  91 CLVDGCTSDLSKCRDYHRRHKVCELHSKTPKVFIKGQEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQP 167
                     **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MGYNLKTPWR LAELENQNIP HITQTPVSCS LGVHQATGHC SVDLKLGNSS DLEDKLVEKF  60
AGPGDYLMES SSSGSSKRVR TPANGTQVPS CLVDGCTSDL SKCRDYHRRH KVCELHSKTP  120
KVFIKGQEQR FCQQCSRFHS LGEFDEGKRS CRKRLDGHNR RRRKPQPDSL SVNSSRLFSN  180
HQGTRYLQFG GSHMFSSSSE SSAWTGAVKL ENDPMLYTSQ CSLNFSSGKN LFPGSLSQGY  240
RSGKQFPFLQ CTSSAFPGES LCQTILGADS TLGSGCSSQK IFSDGPNRVV DSNRALSLLS  300
SPSAETQEIG LSHMVQPDMN PPAQSLIPSL NFSFPGMESG PVDSVLVADG SSNANLHGQG  360
MFQIGPDGSS ASGSLQTLSF SWE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148165KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.17e-50SBP family protein