PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021644340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 383aa MW: 41551.3 Da PI: 7.9959 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.7 | 1.2e-41 | 91 | 167 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ XP_021644340.1 91 CLVDGCTSDLSKCRDYHRRHKVCELHSKTPKVFIKGQEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQP 167 **************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MGYNLKTPWR LAELENQNIP HITQTPVSCS LGVHQATGHC SVDLKLGNSS DLEDKLVEKF 60 AGPGDYLMES SSSGSSKRVR TPANGTQVPS CLVDGCTSDL SKCRDYHRRH KVCELHSKTP 120 KVFIKGQEQR FCQQCSRFHS LGEFDEGKRS CRKRLDGHNR RRRKPQPDSL SVNSSRLFSN 180 HQGTRYLQFG GSHMFSSSSE SSAWTGAVKL ENDPMLYTSQ CSLNFSSGKN LFPGSLSQGY 240 RSGKQFPFLQ CTSSAFPGES LCQTILGADS TLGSGCSSQK IFSDGPNRVV DSNRALSLLS 300 SPSAETQEIG LSHMVQPDMN PPAQSLIPSL NFSFPGMESG PVDSVLVADG SSNANLHGQG 360 MFQIGPDGSS ASGSLQTLSF SWE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 165 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 7e-50 | SBP family protein |