PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644278.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 481aa MW: 52656.4 Da PI: 8.3921

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.4	7.3e-42	187	264	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ XP_021644278.1 187 RCQVEGCNLDLSSAKDYHRKHRVCESHSKSPTVTVAGVERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQP 264 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MSSLSLMEWN TKPPIQWDWE NLIMFNATSE HPKKLRLPEW EIDGETGIDS GSLYSSGSGS 60 GSGGGSGSDL GLASLSKSSK SASTNSSSIG EVKTSKFTLE ASEAIPGDSS NKEVLINAKP 120 TGISSTLEAS VGSGEPLLGL KLGKRTYFED VCAGSNAKTS SFSVTPGSSV SPPKRSKSSG 180 QASPAPRCQV EGCNLDLSSA KDYHRKHRVC ESHSKSPTVT VAGVERRFCQ QCSRFHGLSE 240 FDEKKRSCRR RLSDHNARRR KPQPESVQLT PARLSSSLYD ERQQMSLVWN RAPLVYSRPN 300 ENLTWEGTSS SKFTITKEYV TKPAKGGIDG QLHLPGNDLR TSIPMHPHDS KSLLPSKSKV 360 ITAEVLNQGL EESIISPNVD ATQDLHRALS LLSTNSWGSC EQKSISHEQS ARTSHTGMPQ 420 SMLHVMPQSV PLASSDHWRT EQSTDSRVHN LTTNNYNSNY NQEFQLLRTP YDSDFYSSQL 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MSSLSLMEWN TKPPIQWDWE NLIMFNATSE HPKKLRLPEW EIDGETGIDS GSLYSSGSGS  60
GSGGGSGSDL GLASLSKSSK SASTNSSSIG EVKTSKFTLE ASEAIPGDSS NKEVLINAKP  120
TGISSTLEAS VGSGEPLLGL KLGKRTYFED VCAGSNAKTS SFSVTPGSSV SPPKRSKSSG  180
QASPAPRCQV EGCNLDLSSA KDYHRKHRVC ESHSKSPTVT VAGVERRFCQ QCSRFHGLSE  240
FDEKKRSCRR RLSDHNARRR KPQPESVQLT PARLSSSLYD ERQQMSLVWN RAPLVYSRPN  300
ENLTWEGTSS SKFTITKEYV TKPAKGGIDG QLHLPGNDLR TSIPMHPHDS KSLLPSKSKV  360
ITAEVLNQGL EESIISPNVD ATQDLHRALS LLSTNSWGSC EQKSISHEQS ARTSHTGMPQ  420
SMLHVMPQSV PLASSDHWRT EQSTDSRVHN LTTNNYNSNY NQEFQLLRTP YDSDFYSSQL  480
N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	261	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-86	SBP family protein