PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644127.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 366aa    MW: 40125.1 Da    PI: 9.7686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.8e-1385129147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_021644127.1  85 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 129
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MVSVNPNPAQ GFYFFDPMGM GLTGLNSLRP PMTSTNTTTT DTTIATNTTA VNTSASTTSA  60
AANTVAFADD PSKKIRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI  120
QIRSHAQKYF LKVQKSGTSE HVPPPRPKRK AAHPYPQKAA KNAAPVVSQV TGPFQSSSAS  180
LERGYVYRPD SSSVLGNPMT GGSLTTRGFN SLAPVNVSQV TKDDAGLAGP TIAHNCCYSS  240
SNESTPRTWQ TSEIIDRGDQ GKPMRVMPDF AQVYSFIGSV FDPNASGQLQ TLKQMDPINL  300
ETVLLLMRNL SINLTSPEFE DHRRLLASYD INTEKAKSVG PYSNIGADKT QNPFSSKRSE  360
MLKSFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-96MYB_related family protein