PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643936.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 300aa    MW: 32236.4 Da    PI: 7.9162
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601011.1e-314107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+
  XP_021643936.1   4 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQA 98 
                     6********************************************************************************************** PP

          DUF260  91 kaelallke 99 
                     ++e++l ++
  XP_021643936.1  99 AVEAVLKGT 107
                     **9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MRMSCNGCRV LRKGCSENCS IRPCLQWIKS PESQANATVF LAKFYGRAGL MNLINAGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGTPIT PINSEAAANG  120
HGPPLKAYDI RHVSKDENSA ASNDPNRVKA RCRVRRAVKP KVSNNKQSGG AGFGSAVEPA  180
RDDLTRSTSH ESTVSHQSEL AMVDGDSKES ESMVSVETAE ASLLFRAEPE SAAKSNEGVQ  240
DHASTEMAGL GLELTLGLEP LSRASHVVPV KKRKLEAYGY GSSDDESCKI ELGLDCPARH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-100LBD family protein