PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021643815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 306aa MW: 34391.8 Da PI: 7.1771 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 48 | 2e-15 | 223 | 248 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ +++tGtC+yGd C+FaHg XP_021643815.1 223 FKTELCNKWQETGTCPYGDHCQFAHG 248 79***********************9 PP | |||||||
2 | zf-CCCH | 21 | 5.8e-07 | 261 | 286 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykte Cr +++ +C+yG rC+F H+ XP_021643815.1 261 YKTEVCRMVLAGDICPYGHRCHFRHV 286 9**********55**********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MQNDAASTTA NDDLNIATES QEFLPNEVDF TSIYCPKSSH TLTPFLDSRL VTQQQDLINR 60 SALCLTRLRE AAREVESLRL ENAALRSVNR ELNNQLSFVI QSSVQKHCLS SDCNTTPFEI 120 LNGFNNLCNI GGDGGEELCE DDIPTSVKER ETVDATDRAS LPKSISVRSN GYLKTSQAGV 180 SKTRGVTRPK TASPINGAQK VYVRGGKKEE KPLELEVYSQ GMFKTELCNK WQETGTCPYG 240 DHCQFAHGVE ELRPVIRHPR YKTEVCRMVL AGDICPYGHR CHFRHVLTEQ ERFMGHLKPR 300 AIKLER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68200.1 | 1e-86 | C3H family protein |