PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643729.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 728aa    MW: 79478.2 Da    PI: 6.5077
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.4e-07306326526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C++f++ G C++Gd C +aHg
  XP_021643729.1 306 PCPDFRK-GACRRGDMCEYAHG 326
                     8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MCCGWERLKL TPTRILPLIS SEESRPTNID MNHISVETED TFASLLELAA NNDAEGFKRS  60
IERDPVCVDE IGIWYSRQKG SKQMVNQHRT PLMVAATYGA VDVIRIILSL SDADVNRSCG  120
LDKSTALHCA ASGGAANAVD AVKLLLAAGG DPNLMDANGH HPIDVIAVPP KLQDMKYTLE  180
ELLATDGSVF ERNLRVSTAT ANSSSPPLSP SVENSSPLSS SDSPVKSKLN DVPVFSTSEK  240
KEYPVDPSLP DIKNSIYATD EFRMYSFKVR PCSRAYSHDW TECPFVHPGE NARRRDPRKF  300
HYSCVPCPDF RKGACRRGDM CEYAHGVFEC WLHPAQYRTR LCKDGTSCAR RVCFFAHTVE  360
ELRPLYLSTG SAVPSPRTST SGATAMDFAA AMSLLPGSPS SLSVMSPSPF TPPMSPSGNG  420
MSHSSVAWPQ PNVPALHLPG NNLQSSRLRS FFNARDIPAE DYSLLPDFDV QQQQLLNELS  480
SLTQPSLSNN SLNRSGRLKT LTPSNLDDLF SAESSSPRYA DQALAAAVFS PTHKSAVLNQ  540
FQQQQSMLSP INTNFSPKNV DHPLLQASLA SGRMSPRNVE PISPMSPRVS MLAQREKQQQ  600
QLRSLSSREL GSNSAATVGP HVNSWSKWGS SNGKPDWTVS ADELGKLRRS NSFELGNGEE  660
PDLSWVQSLV KESPTEMKEK LAMPNSSVAA GASSSEGLNM NSQIESVDHA LGAWIDQLHI  720
DQLVAQQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein