PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643650.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 449aa MW: 49133 Da PI: 6.1963

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	349	391	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_021643650.1 349 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 391 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MLSGLNGTVW MEDKEARDSN TNNNINNSCV VMESKQEMGS ISNFKSMLDV EDDWYVTNTT 60 IHNHHDTIRD ITFSPNLAEP DNLFLHSVDS SSSCSPTSSV FNNLDPSHVH YFMHSKPTLS 120 SLLNVVSNNP LEHGFDLGEI GFLENQATAP TTTTNASPLL NRGAGVLGSY IDFSSNNQIS 180 TSNLCSDLPF PTTCMLQLPE NGPGLTGFRG SDESSGNTLF LNRSKLLRPL ETFPSMGAQP 240 TLFQKRAALR KNLGDLSGIE IDKGKRELTQ LGKENEKKRK MGNVDDIVED VSIDGSGLNY 300 DSDELTENTK MEEIGKNGGN SSNANSSVTG GGVGDQKGKK KGLPAKNLMA ERRRRKKLND 360 RLYMLRSVVP KISKMDRASI LGDAIEYLKE LLQRINDLHN ELESTPPGSS LTPTSFHPLT 420 PTPSTLSSRI KDKLCPSPLP SPNGQPARF

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MLSGLNGTVW MEDKEARDSN TNNNINNSCV VMESKQEMGS ISNFKSMLDV EDDWYVTNTT  60
IHNHHDTIRD ITFSPNLAEP DNLFLHSVDS SSSCSPTSSV FNNLDPSHVH YFMHSKPTLS  120
SLLNVVSNNP LEHGFDLGEI GFLENQATAP TTTTNASPLL NRGAGVLGSY IDFSSNNQIS  180
TSNLCSDLPF PTTCMLQLPE NGPGLTGFRG SDESSGNTLF LNRSKLLRPL ETFPSMGAQP  240
TLFQKRAALR KNLGDLSGIE IDKGKRELTQ LGKENEKKRK MGNVDDIVED VSIDGSGLNY  300
DSDELTENTK MEEIGKNGGN SSNANSSVTG GGVGDQKGKK KGLPAKNLMA ERRRRKKLND  360
RLYMLRSVVP KISKMDRASI LGDAIEYLKE LLQRINDLHN ELESTPPGSS LTPTSFHPLT  420
PTPSTLSSRI KDKLCPSPLP SPNGQPARF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	357	KKKGLPAKNLMAERRRRKK
2	351	358	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	9e-72	bHLH family protein