PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021643648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 829aa MW: 93101.4 Da PI: 6.9608 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.9 | 9.3e-24 | 160 | 261 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++ +++a+e+ + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + ++ XP_021643648.1 160 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 251 99*****************************7333.34459************************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+v+v+r+ XP_021643648.1 252 GELRVGVRRA 261 99*****996 PP | |||||||
2 | Auxin_resp | 121.1 | 8.5e-40 | 286 | 368 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st+++F+v+Y+Pr+s++eF+v+v+++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk XP_021643648.1 286 AWHAISTGTMFTVYYKPRTSPAEFIVPVDRYLESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRESKWRCLK 368 89*******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 829 aa Download sequence |
MDSTEISIKG NGGNLRRESF SSGHGEPNDP RNTMEGQQSH SNRRISAREA ETALYTELWH 60 ACAGPLVTVP REKERVFYFP QGHIEQVEAS TNQVADQQVP VYDLPSKILC TVINVQLKAE 120 PDTDEVFAQV TLLPDPNQDE SAVDKEAPPT PPPRFHVHSF CKTLTASDTS THGGFSVLRR 180 HADECLPPLD MSRQPPTQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA 240 GDAFIFLRGE NGELRVGVRR AMRQQGNVPS SVISSHSMHL GVLATAWHAI STGTMFTVYY 300 KPRTSPAEFI VPVDRYLESI KNNYSIGMRF KMRFEGEEAP EQRFTGTIVG IEDADPKRWR 360 ESKWRCLKVR WDETSTIPRP ERVSTWSIEP SLAPPAMSPL PAPRPKRPRS NMFPSSPDSS 420 VLTREGSSKV TVDPHLSSGY SRVLQGQEFS TLRGNFAESN ESDTAEKSVV WPSSIDDEKI 480 DVVSASRRHG SENWMPSGWQ KPTYTDLLSG FGAHANFSHG FGEPFVDQTA TAASRKLVLD 540 QEGKFNYLPS PWSLMSSGLS LKLSESNSKV PVKGCDISFE ARGNVKCSAF NEYPKLNGRR 600 VEQSHGNWLM PLPPPSHFDS HAHARELAPK PILVQEQETG KSTDGKCKLF GIRLFSNPVA 660 PEPVASHRNT FNEPASCIHT QSDQLHVLDS DQRLEHSKFS KMTDDNEQEK QSQAGLHSRD 720 NQGKFQNAST RSCTKVHKQG IALGRSVDLT KFNNYNELIA ELDRLFEFDG ELMAPKKNWL 780 IVYTDDEGDM MLVGDDPWQE FVGMVRKIFI YTREEVQKMN PGTIDSKGF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 70 | 75 | PREKER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |