PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643647.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 856aa    MW: 96054.7 Da    PI: 6.7534
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.89.8e-24160261199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_021643647.1 160 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 251
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_021643647.1 252 GELRVGVRRA 261
                     99*****996 PP
2Auxin_resp1218.9e-40286368183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s++eF+v+v+++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_021643647.1 286 AWHAISTGTMFTVYYKPRTSPAEFIVPVDRYLESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRESKWRCLK 368
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 856 aa     Download sequence    
MDSTEISIKG NGGNLRRESF SSGHGEPNDP RNTMEGQQSH SNRRISAREA ETALYTELWH  60
ACAGPLVTVP REKERVFYFP QGHIEQVEAS TNQVADQQVP VYDLPSKILC TVINVQLKAE  120
PDTDEVFAQV TLLPDPNQDE SAVDKEAPPT PPPRFHVHSF CKTLTASDTS THGGFSVLRR  180
HADECLPPLD MSRQPPTQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA  240
GDAFIFLRGE NGELRVGVRR AMRQQGNVPS SVISSHSMHL GVLATAWHAI STGTMFTVYY  300
KPRTSPAEFI VPVDRYLESI KNNYSIGMRF KMRFEGEEAP EQRFTGTIVG IEDADPKRWR  360
ESKWRCLKVR WDETSTIPRP ERVSTWSIEP SLAPPAMSPL PAPRPKRPRS NMFPSSPDSS  420
VLTREGSSKV TVDPHLSSGY SRVLQGQEFS TLRGNFAESN ESDTAEKSVV WPSSIDDEKI  480
DVVSASRRHG SENWMPSGWQ KPTYTDLLSG FGAHANFSHG FGEPFVDQTA TAASRKLVLD  540
QEGKFNYLPS PWSLMSSGLS LKLSESNSKV PVKGCDISFE ARGNVKCSAF NEYPKLNGRR  600
VEQSHGNWLM PLPPPSHFDS HAHARELAPK PILVQEQETG KSTDGKCKLF GIRLFSNPVA  660
PEPVASHRNT FNEPASCIHT QSDQLHVLDS DQRLEHSKFS KMTDDNEQEK QSQAGLHSRD  720
NQGKFQNAST RSCTKVHKQG IALGRSVDLT KFNNYNELIA ELDRLFEFDG ELMAPKKNWL  780
IVYTDDEGDM MLVGDDPWQE FVGMVRKIFI YTREEVQKMN PGTIDSKGNE NLLDVEGMDT  840
KEVKCPLPPT RSSEIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17075PREKER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein