PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643078.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 317aa MW: 35859.8 Da PI: 5.9707

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.2e-35	10	102	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F++k+y+i++d+++++li+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +++k+ll++ XP_021643078.1 10 FVMKTYQIVNDPATDTLITWGKANNSFIVIDPLDFSERILPVYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRSQKQLLKN 95 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k++ XP_021643078.1 96 IVRRKHS 102 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MEANTIVAPF VMKTYQIVND PATDTLITWG KANNSFIVID PLDFSERILP VYFKHNNFSS 60 FVRQLNTYGF RKVDPDRWEF ANEWFLRSQK QLLKNIVRRK HSKGSCMQAK IEDFDNEELV 120 MEIARLKQEQ RVMEKELEDM NKRLEATERR PQQMMSFLYK VVQDPDLLPR MILQKERTKQ 180 LNDKKCRLMI SSSSSSSGGA AVSSLVKSEE EEWGSVGVIS SPETGFCQSS PSPEKNIIRW 240 LGEGNYVPDS APNTFTSISM GGGIRNTVTV ARPPPENNLI GCGDDRVGQI SYFGELAADV 300 EARPPPPYPF SLLGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	9e-93	HSF family protein