PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642872.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 890aa MW: 98087.7 Da PI: 7.1881

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5e-19	348	447	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ l+++d +gr+W++++++ +++s++yvl+ G ++ +L++gD+++F++++ +++ XP_021642872.1 348 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGVPLRIQDFKGREWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTITFSRID-PGGK 440 99************************666778999***********99899999999.*******************887.7887 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_021642872.1 441 LVMGFRK 447 8888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGYF VNWIWIAVMC YNMVSSTYDD 60 SVYCDTFHLE ESGWRECKIC SKRLHCGCIA STYLLEILDF GGVGCTSCAK ISQLHSVRSI 120 HSNEISNAFG SVTTNNAVGL ESTPPENRVA GSALDEGKLA QLCRIMEANK PTLLCQSEGA 180 DTNASPGHFR QEEVIHPIGE AGTGFSNESQ LSVGISRFAK PDSIRPILEM RDMNGSLVPS 240 LTMTLGAPSG TTSFGPYPCG AVEGRGKSIT PPFQQGQRSR PILPKLPKPG SAGSSETNNA 300 VVPELRIART PAEGRGKNQL LPRYWPRITD LELQQLSGDL NSNIVPLFEK VLSASDAGRI 360 GRLVLPKACA EAYFPPISQS EGVPLRIQDF KGREWTFQFR FWPNNNSRMY VLEGVTPCIQ 420 SMQLQAGDTI TFSRIDPGGK LVMGFRKATN NSDTQEAQTT ALPSGTASAE TSFSADGDIG 480 WNKGESQGGK INGDARHQPT AEKKRNRNIG PKSKRLLMHR EDALELRLTW EEAQDLLRPP 540 PSVKPSIVTI EDHEFEEFDE PPVFGKRTIF AHQSSGEVLN AICMGAEFIK PPVRGQEQWA 600 QCDDCSKWRK LPEHVLLPPK WTCSDNIWDS SRCLCSAPEE ISPKDLDNLL RLSKDFKKRR 660 IVGRHKPSPE CEPSGLDALA SAAVLGDNIG DTGEPSVGAT TKHPRHRSGC TCIVCIQPPS 720 GKGKHNPTCT CNVCMTVKRR FKTLMLRKKK RQSEEHEAEI SQKDNNDHKD ESEMISKLSN 780 AVLPVSNSGN EVSQNRKQTE VAETSAGSLD LNCHPNRDEM QLDMPGLSMM NIGDPFDSYT 840 KQNGLPNLMC DRHSSFGPCL HSQTNGEYPR TLSDEAFHDS MGWNRESRGD

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGYF VNWIWIAVMC YNMVSSTYDD  60
SVYCDTFHLE ESGWRECKIC SKRLHCGCIA STYLLEILDF GGVGCTSCAK ISQLHSVRSI  120
HSNEISNAFG SVTTNNAVGL ESTPPENRVA GSALDEGKLA QLCRIMEANK PTLLCQSEGA  180
DTNASPGHFR QEEVIHPIGE AGTGFSNESQ LSVGISRFAK PDSIRPILEM RDMNGSLVPS  240
LTMTLGAPSG TTSFGPYPCG AVEGRGKSIT PPFQQGQRSR PILPKLPKPG SAGSSETNNA  300
VVPELRIART PAEGRGKNQL LPRYWPRITD LELQQLSGDL NSNIVPLFEK VLSASDAGRI  360
GRLVLPKACA EAYFPPISQS EGVPLRIQDF KGREWTFQFR FWPNNNSRMY VLEGVTPCIQ  420
SMQLQAGDTI TFSRIDPGGK LVMGFRKATN NSDTQEAQTT ALPSGTASAE TSFSADGDIG  480
WNKGESQGGK INGDARHQPT AEKKRNRNIG PKSKRLLMHR EDALELRLTW EEAQDLLRPP  540
PSVKPSIVTI EDHEFEEFDE PPVFGKRTIF AHQSSGEVLN AICMGAEFIK PPVRGQEQWA  600
QCDDCSKWRK LPEHVLLPPK WTCSDNIWDS SRCLCSAPEE ISPKDLDNLL RLSKDFKKRR  660
IVGRHKPSPE CEPSGLDALA SAAVLGDNIG DTGEPSVGAT TKHPRHRSGC TCIVCIQPPS  720
GKGKHNPTCT CNVCMTVKRR FKTLMLRKKK RQSEEHEAEI SQKDNNDHKD ESEMISKLSN  780
AVLPVSNSGN EVSQNRKQTE VAETSAGSLD LNCHPNRDEM QLDMPGLSMM NIGDPFDSYT  840
KQNGLPNLMC DRHSSFGPCL HSQTNGEYPR TLSDEAFHDS MGWNRESRGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	738	749	KRRFKTLMLRKK
2	738	751	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein