PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642839.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 840aa    MW: 92332.9 Da    PI: 6.4628
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.7e-192179357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_021642839.1 21 KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79
                    5679*****************************************************97 PP
2START179.51.9e-561663742205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+++s+g  g+++l 
  XP_021642839.1 166 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNALSTGngGTIELL 259
                     7899******************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+   ++++vRae+lp g+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_021642839.1 260 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppTQHFVRAEMLPGGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 354
                     *******************************************99999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s +  ++kt++a+l+++++
  XP_021642839.1 355 ESPTLLAQKTTMAALRHLRQ 374
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MMAVTSACKD GGSKMAMDNG KYVRYTPEQV EALERLYHEC PKPSSMRRQQ LIRECPILSN  60
IEPKQIKVWF QNRRCREKQR KEASRLQAVN RKLTAMNKLL MEENDRLQKQ VSQLVYENSY  120
FRQQTQNATN LATTDTSCES VVTSGQHHLT PQRPPRDASP AGLLSIAEET LAEFLSKATG  180
TAVEWVQMPG MKPGPDSIGI VAISHGCPGV AARACGLVGL EPTRVAEILK DRPSWFRDCR  240
AVDVLNALST GNGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV VCERSLNNTQ  300
NGPSMPPTQH FVRAEMLPGG YLIRPCEGGG SIIHIVDHMD LEPWSVPEVL RPLYESPTLL  360
AQKTTMAALR HLRQISHEVS QPNASGWGRR PAALRALSQR LSKGFNEAVN GFTDDGWSML  420
ESDGIDDVTV LVNSSPGKMM GLNISYANGF PSMSNGVLCA KASMLLQNVP PAILLRFLRE  480
HRSEWADSGI DAYAAAAVKA GPCTLPVSRA GNFGGQVILP LAHTIEHEEF MEVIKLENMG  540
YREDMMMPGD IFLLQLCSGV DENAVGTCAE LIFAPIDASF SDDAPIIPSG FRIIPLDSRM  600
DATSPNRTLD LASALDVGPA GNKASGDFSG HCGSSKSVMT IAFQFAFELH LQENVASMAR  660
QYVRSVIASV QRVALALSPS RFGSHAGLRP PPGTPEAHTL ARWICQSYRC YLGVELLKSE  720
GSESILKSLW HHSDAVMCCS LKALPVFTFA NQAGLDMLET TLVALQDITL EKIFDDNGRK  780
TLCSEFPQIM QQGFMCLQGG ICLSSMGRPI SYERAVAWKV LNEEETAHCI CFMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein