PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642817.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 657aa MW: 74907.1 Da PI: 5.6762

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	3.9e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_021642817.1 6 LPPGFRFHPTDEELVAYYLKRKINGHKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ vg+kktLv+y+grap+g +tdWvmheyrl XP_021642817.1 100 S-HTRPVGMKKTLVYYRGRAPHGCRTDWVMHEYRL 133 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING HKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS HTRPVGMKKT LVYYRGRAPH 120 GCRTDWVMHE YRLDERECEI ASGLQDAYAL CRVFKKSANI PKISEHFAST SNQMASELSS 180 SMELYSEGRC EDFESSNYPM PIETCSPSIA NNGFPLHLGE TRDGTWKQYL SENDFSFSSP 240 SFSGYGNVPY PPSKVDISLD SARLQHRFSM PPLEVEDFPQ VGLTDLKVMH STPMHDQNTS 300 QTGILQEILS VAHASQELIN QSNNLQDTWG GNYSADNNDF TFIAGKDAHG HLYSDMYSMK 360 CMNKSWGDPN LRSIEIENLD EDFKTEGVTE NLRWVGMSNE EPEKSFMEEH KVVPIENIST 420 FQIREDNELQ GNEHRGDCLG FNGTDDYSLG FINDDPNGYF IDDGNVDDLA SSPSFEVVEE 480 IKVNHGMFVS TRQAAETFFH RLVPSQTVKI HLNPEMTDSF SIRKVDMHSA LDETTRSNNT 540 FSRENNFLEI SQSIHPWKKF ATTVVCMVLV LLMHCFYLGE NVGNENKLMH GFSESANAKP 600 KKKEERNKWN EKKTEKDFLV SIRGGNQFSV FLKKLGLFLS ISLALCTMWV NHVILTS

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING HKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS HTRPVGMKKT LVYYRGRAPH  120
GCRTDWVMHE YRLDERECEI ASGLQDAYAL CRVFKKSANI PKISEHFAST SNQMASELSS  180
SMELYSEGRC EDFESSNYPM PIETCSPSIA NNGFPLHLGE TRDGTWKQYL SENDFSFSSP  240
SFSGYGNVPY PPSKVDISLD SARLQHRFSM PPLEVEDFPQ VGLTDLKVMH STPMHDQNTS  300
QTGILQEILS VAHASQELIN QSNNLQDTWG GNYSADNNDF TFIAGKDAHG HLYSDMYSMK  360
CMNKSWGDPN LRSIEIENLD EDFKTEGVTE NLRWVGMSNE EPEKSFMEEH KVVPIENIST  420
FQIREDNELQ GNEHRGDCLG FNGTDDYSLG FINDDPNGYF IDDGNVDDLA SSPSFEVVEE  480
IKVNHGMFVS TRQAAETFFH RLVPSQTVKI HLNPEMTDSF SIRKVDMHSA LDETTRSNNT  540
FSRENNFLEI SQSIHPWKKF ATTVVCMVLV LLMHCFYLGE NVGNENKLMH GFSESANAKP  600
KKKEERNKWN EKKTEKDFLV SIRGGNQFSV FLKKLGLFLS ISLALCTMWV NHVILTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-159	NAC family protein