PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 25232.8 Da PI: 9.8419 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3e-14 | 45 | 91 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L k+v+++k+L XP_021642788.1 45 KSHKEAERRRRQRINAHLSTLRSLLPSV-----TKTDKASLLAKVVHHVKEL 91 58*************************8.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MLPFQGCYGF VHRDPSVVNA MDFKVGASIL RSSSRLGKRS TNAFKSHKEA ERRRRQRINA 60 HLSTLRSLLP SVTKTDKASL LAKVVHHVKE LIRQAAQVAR QDGDGFCSGS SGGGGGGSEP 120 EKYCAFPGES DEATLSYCDG EAKTMRVSVC CENRPGLNWE LSQAIRLVRG RAVRAEMMTV 180 GGLTKCVVVL QWASGGGGDE EARILRRALK AVVENRVSGC GLGQVVHEMK NND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 1e-27 | bHLH family protein |