PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642685.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 698aa    MW: 77950.1 Da    PI: 6.5913
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.9e-24129229198
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+kvlt sd++++g +++ +k+a+e+     + +++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++
  XP_021642685.1 129 FCKVLTVSDTSTHGGFSVLRKHATEClpqldMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVASKRLVAGDSFVFL--RGENG 221
                     99****************************9666667789************************************************..44999 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     el+v+v+r
  XP_021642685.1 222 ELRVGVRR 229
                     9*****98 PP
2Auxin_resp106.33.4e-35255334183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F v+Y+Pr+  s+F+++v+k+++a+++k++vGmRfkm+fe+eds+err+sGt+vgv+d++p +W +SkWr+Lk
  XP_021642685.1 255 ASHAVATQTLFVVYYKPRT--SQFIISVNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGTIVGVEDFSP-HWVDSKWRQLK 334
                     789***************6..9*************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MAANLGRSFS QANTEGCGGG DVLYTELWKA CAGPLVDVPR NGERVYYFPQ SHMEQLEAST  60
NQELNQSVPL FNLPSKILCR VINVQLLAEQ ETDEVYAQIT LLPEPDQPEP TCPDPCPPES  120
SLCPTVHSFC KVLTVSDTST HGGFSVLRKH ATECLPQLDM TQPTPTQELV AKDLHGYEWR  180
FKHIFRGQPR RHLLTTGWST FVASKRLVAG DSFVFLRGEN GELRVGVRRL TCQQSSMPSS  240
VISSQSMHLG VLATASHAVA TQTLFVVYYK PRTSQFIISV NKYLEAVNNK FAVGMRFKMR  300
FEGEDSPERR FSGTIVGVED FSPHWVDSKW RQLKVQWDEP ASILRPERVS PWEIEPFVSS  360
APTNMAQPVA VKSKRPRPPI EIPTLDLSST ASQPWNSPLT QSHYLTQLNG TAEGKRNENH  420
FMWHHKQTGI NSHTNSISRS PTEGGWLSSP HVNVSRHLFQ EATEDSKSVS NWPVISGYST  480
PQSAKLKNDS ILDPVEKGRK YEAGTSYRLF GIELINRFTS SLPVEIEKAP AQPVSISVGP  540
TEGHVLSTLS AVDSDKKSDV SKEKKPEQLQ VSPKDVQSRQ SCSASTRSRT KVQMQGIAVG  600
RAIDLTMMKG YDQLLDELEE MFDIKGQLHC HKWEIVYTDD EGDMMLVGDD PWLEFCNMVR  660
RIFICSSQDL KKMTPGSKLP MFSIEGEGTV ISSDSADN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1374378KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein