PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 195aa MW: 21479.2 Da PI: 10.1213 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133 | 1e-41 | 73 | 149 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C+adls+ak yhrrhkvC h+ka+ vlv+g++qrfCqqCsrfhel efDe+krsCrrrLa+hnerrrk++a XP_021642487.1 73 CQAEKCTADLSDAKPYHRRHKVCANHAKAQIVLVAGIRQRFCQQCSRFHELWEFDETKRSCRRRLAGHNERRRKNAA 149 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MDGKGKLRMM GNMTKKELTE HGWESSDDDL KMGCVESDVE SSKKNKVVAG GGGGGGGRIG 60 LGGGSGSGGM RSCQAEKCTA DLSDAKPYHR RHKVCANHAK AQIVLVAGIR QRFCQQCSRF 120 HELWEFDETK RSCRRRLAGH NERRRKNAAE SHTEGSSHKG TGSQLKDMVC GQVNDRGRIK 180 ITIQENATYK HFQTR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 54 | 64 | GGGGRIGLGGG |
2 | 55 | 65 | GGGGRIGLGGG |
3 | 56 | 66 | GGGGRIGLGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 7e-45 | SBP family protein |