PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642487.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 195aa    MW: 21479.2 Da    PI: 10.1213
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1331e-4173149278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+e+C+adls+ak yhrrhkvC  h+ka+ vlv+g++qrfCqqCsrfhel efDe+krsCrrrLa+hnerrrk++a
  XP_021642487.1  73 CQAEKCTADLSDAKPYHRRHKVCANHAKAQIVLVAGIRQRFCQQCSRFHELWEFDETKRSCRRRLAGHNERRRKNAA 149
                     **************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MDGKGKLRMM GNMTKKELTE HGWESSDDDL KMGCVESDVE SSKKNKVVAG GGGGGGGRIG  60
LGGGSGSGGM RSCQAEKCTA DLSDAKPYHR RHKVCANHAK AQIVLVAGIR QRFCQQCSRF  120
HELWEFDETK RSCRRRLAGH NERRRKNAAE SHTEGSSHKG TGSQLKDMVC GQVNDRGRIK  180
ITIQENATYK HFQTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15464GGGGRIGLGGG
25565GGGGRIGLGGG
35666GGGGRIGLGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.17e-45SBP family protein